Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
CHRNA3P32297 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA3P32297 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.98□□□□□ -0.01
CHRNA3P32297 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.98□□□□□ -0.01
CHRNA3P32297 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.98□□□□□ -0.01
CHRNA3P32297 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
CHRNA3P32297 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA3P32297 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA3P32297 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA3P32297 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA3P32297 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.98□□□□□ -0.01
CHRNA3P32297 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRNA3P32297 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRNA3P32297 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRNA3P32297 CICP12-201ENST00000455801 843 ntBASIC14.98□□□□□ -0.01
CHRNA3P32297 TUBB8P8-201ENST00000458717 1058 ntBASIC14.98□□□□□ -0.01
CHRNA3P32297 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.98□□□□□ -0.01
CHRNA3P32297 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRNA3P32297 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA3P32297 AL451050.2-201ENST00000606967 682 ntBASIC14.98□□□□□ -0.01
CHRNA3P32297 AC027601.3-201ENST00000622907 509 ntBASIC14.98□□□□□ -0.01
CHRNA3P32297 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.98□□□□□ -0.01
CHRNA3P32297 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.98□□□□□ -0.01
CHRNA3P32297 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA3P32297 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA3P32297 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA3P32297 F2-205ENST00000530231 1849 ntTSL 5 BASIC14.98□□□□□ -0.01
CHRNA3P32297 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRNA3P32297 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA3P32297 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA3P32297 PEG13-201ENST00000631594 5667 ntBASIC14.98□□□□□ -0.01
CHRNA3P32297 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.98□□□□□ -0.01
CHRNA3P32297 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRNA3P32297 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA3P32297 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA3P32297 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.97□□□□□ -0.01
CHRNA3P32297 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CHRNA3P32297 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA3P32297 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CHRNA3P32297 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CHRNA3P32297 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA3P32297 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC14.97□□□□□ -0.01
CHRNA3P32297 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA3P32297 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CHRNA3P32297 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CHRNA3P32297 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA3P32297 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CHRNA3P32297 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.97□□□□□ -0.01
CHRNA3P32297 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.97□□□□□ -0.01
CHRNA3P32297 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CHRNA3P32297 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CHRNA3P32297 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.97□□□□□ -0.01
CHRNA3P32297 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CHRNA3P32297 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.97□□□□□ -0.01
CHRNA3P32297 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA3P32297 RNMTL1P1-201ENST00000454103 560 ntBASIC14.97□□□□□ -0.01
CHRNA3P32297 AKR7A2P1-201ENST00000460134 915 ntBASIC14.97□□□□□ -0.01
CHRNA3P32297 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.97□□□□□ -0.01
CHRNA3P32297 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.97□□□□□ -0.01
CHRNA3P32297 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.97□□□□□ -0.01
CHRNA3P32297 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.97□□□□□ -0.01
CHRNA3P32297 AC020914.3-201ENST00000594712 304 ntBASIC14.97□□□□□ -0.01
CHRNA3P32297 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.97□□□□□ -0.01
CHRNA3P32297 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA3P32297 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC14.97□□□□□ -0.01
CHRNA3P32297 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA3P32297 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA3P32297 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CHRNA3P32297 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CHRNA3P32297 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA3P32297 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC14.96□□□□□ -0.01
CHRNA3P32297 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA3P32297 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA3P32297 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA3P32297 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.96□□□□□ -0.01
CHRNA3P32297 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.96□□□□□ -0.01
CHRNA3P32297 AC138028.6-201ENST00000616106 1482 ntBASIC14.96□□□□□ -0.01
CHRNA3P32297 AL359845.1-201ENST00000458202 1648 ntBASIC14.96□□□□□ -0.01
CHRNA3P32297 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.96□□□□□ -0.01
CHRNA3P32297 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CHRNA3P32297 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA3P32297 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.96□□□□□ -0.01
CHRNA3P32297 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA3P32297 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC14.96□□□□□ -0.01
CHRNA3P32297 AC083964.2-201ENST00000623988 2396 ntBASIC14.96□□□□□ -0.01
CHRNA3P32297 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA3P32297 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CHRNA3P32297 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA3P32297 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.96□□□□□ -0.01
CHRNA3P32297 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA3P32297 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA3P32297 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA3P32297 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CHRNA3P32297 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA3P32297 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CHRNA3P32297 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.96□□□□□ -0.01
CHRNA3P32297 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CHRNA3P32297 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA3P32297 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.96□□□□□ -0.01
CHRNA3P32297 AC136604.1-202ENST00000425471 771 ntBASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms