Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
VARSP26640 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.07□□□□□ -0.16
VARSP26640 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.07□□□□□ -0.16
VARSP26640 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.07□□□□□ -0.16
VARSP26640 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.07□□□□□ -0.16
VARSP26640 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VARSP26640 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.07□□□□□ -0.16
VARSP26640 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VARSP26640 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.07□□□□□ -0.16
VARSP26640 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
VARSP26640 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.07□□□□□ -0.16
VARSP26640 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
VARSP26640 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VARSP26640 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
VARSP26640 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VARSP26640 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VARSP26640 TMBIM7P-202ENST00000641474 1516 ntBASIC14.07□□□□□ -0.16
VARSP26640 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
VARSP26640 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
VARSP26640 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VARSP26640 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.07□□□□□ -0.16
VARSP26640 FAM9B-203ENST00000428477 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VARSP26640 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.07□□□□□ -0.16
VARSP26640 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.07□□□□□ -0.16
VARSP26640 MAGEA5-201ENST00000446757 942 ntBASIC14.07□□□□□ -0.16
VARSP26640 KLF2P1-201ENST00000447438 1042 ntBASIC14.07□□□□□ -0.16
VARSP26640 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.07□□□□□ -0.16
VARSP26640 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VARSP26640 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VARSP26640 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.07□□□□□ -0.16
VARSP26640 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.07□□□□□ -0.16
VARSP26640 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.07□□□□□ -0.16
VARSP26640 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VARSP26640 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
VARSP26640 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.07□□□□□ -0.16
VARSP26640 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC14.07□□□□□ -0.16
VARSP26640 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VARSP26640 AC009955.4-201ENST00000597192 544 ntBASIC14.07□□□□□ -0.16
VARSP26640 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VARSP26640 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VARSP26640 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VARSP26640 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.07□□□□□ -0.16
VARSP26640 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VARSP26640 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VARSP26640 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VARSP26640 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VARSP26640 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.07□□□□□ -0.16
VARSP26640 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
VARSP26640 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VARSP26640 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
VARSP26640 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VARSP26640 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC14.06□□□□□ -0.16
VARSP26640 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VARSP26640 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
VARSP26640 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.06□□□□□ -0.16
VARSP26640 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
VARSP26640 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VARSP26640 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
VARSP26640 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VARSP26640 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.06□□□□□ -0.16
VARSP26640 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VARSP26640 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VARSP26640 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC14.06□□□□□ -0.16
VARSP26640 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.06□□□□□ -0.16
VARSP26640 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
VARSP26640 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.06□□□□□ -0.16
VARSP26640 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.06□□□□□ -0.16
VARSP26640 AC079178.1-201ENST00000420915 656 ntBASIC14.06□□□□□ -0.16
VARSP26640 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
VARSP26640 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.06□□□□□ -0.16
VARSP26640 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
VARSP26640 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.06□□□□□ -0.16
VARSP26640 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VARSP26640 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.06□□□□□ -0.16
VARSP26640 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.06□□□□□ -0.16
VARSP26640 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC14.06□□□□□ -0.16
VARSP26640 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.06□□□□□ -0.16
VARSP26640 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.06□□□□□ -0.16
VARSP26640 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.06□□□□□ -0.16
VARSP26640 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
VARSP26640 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VARSP26640 AC244157.2-201ENST00000616239 1006 ntBASIC14.06□□□□□ -0.16
VARSP26640 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VARSP26640 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
VARSP26640 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VARSP26640 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VARSP26640 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.06□□□□□ -0.16
VARSP26640 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.06□□□□□ -0.16
VARSP26640 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.06□□□□□ -0.16
VARSP26640 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.06□□□□□ -0.16
VARSP26640 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VARSP26640 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VARSP26640 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.06□□□□□ -0.16
VARSP26640 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
VARSP26640 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VARSP26640 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.06□□□□□ -0.16
VARSP26640 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.06□□□□□ -0.16
VARSP26640 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VARSP26640 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.06□□□□□ -0.16
VARSP26640 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms