Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SYN1P17600 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SYN1P17600 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SYN1P17600 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SYN1P17600 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SYN1P17600 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SYN1P17600 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SYN1P17600 THAP4-203ENST00000402545 833 ntTSL 5 BASIC15.14■□□□□ 0.01
SYN1P17600 OR7E155P-201ENST00000412208 1014 ntBASIC15.14■□□□□ 0.01
SYN1P17600 CA5BP1-205ENST00000435806 1064 ntBASIC15.14■□□□□ 0.01
SYN1P17600 RBM14-205ENST00000443702 732 ntTSL 3 BASIC15.14■□□□□ 0.01
SYN1P17600 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC15.14■□□□□ 0.01
SYN1P17600 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC15.14■□□□□ 0.01
SYN1P17600 AF186996.6-201ENST00000485294 149 ntBASIC15.14■□□□□ 0.01
SYN1P17600 COQ10BP2-201ENST00000513804 724 ntBASIC15.14■□□□□ 0.01
SYN1P17600 CD44-224ENST00000526669 870 ntTSL 5 BASIC15.14■□□□□ 0.01
SYN1P17600 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC15.14■□□□□ 0.01
SYN1P17600 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC15.14■□□□□ 0.01
SYN1P17600 AC022001.3-201ENST00000606330 596 ntBASIC15.14■□□□□ 0.01
SYN1P17600 AC104506.1-201ENST00000609247 429 ntBASIC15.14■□□□□ 0.01
SYN1P17600 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC15.14■□□□□ 0.01
SYN1P17600 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC15.14■□□□□ 0.01
SYN1P17600 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
SYN1P17600 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SYN1P17600 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SYN1P17600 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.14■□□□□ 0.01
SYN1P17600 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SYN1P17600 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SYN1P17600 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.14■□□□□ 0.01
SYN1P17600 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
SYN1P17600 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SYN1P17600 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SYN1P17600 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
SYN1P17600 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.14■□□□□ 0.01
SYN1P17600 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.14■□□□□ 0.01
SYN1P17600 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC15.14■□□□□ 0.01
SYN1P17600 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SYN1P17600 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SYN1P17600 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.14■□□□□ 0.01
SYN1P17600 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC15.14■□□□□ 0.01
SYN1P17600 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.14■□□□□ 0.01
SYN1P17600 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
SYN1P17600 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.13■□□□□ 0.01
SYN1P17600 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYN1P17600 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYN1P17600 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYN1P17600 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYN1P17600 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
SYN1P17600 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
SYN1P17600 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.13■□□□□ 0.01
SYN1P17600 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SYN1P17600 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SYN1P17600 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SYN1P17600 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.13■□□□□ 0.01
SYN1P17600 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SYN1P17600 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYN1P17600 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYN1P17600 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYN1P17600 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYN1P17600 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYN1P17600 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SYN1P17600 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SYN1P17600 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC15.13■□□□□ 0.01
SYN1P17600 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
SYN1P17600 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC15.13■□□□□ 0.01
SYN1P17600 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC15.13■□□□□ 0.01
SYN1P17600 RNA5SP288-201ENST00000516075 93 ntBASIC15.13■□□□□ 0.01
SYN1P17600 OR4A49P-201ENST00000527050 632 ntBASIC15.13■□□□□ 0.01
SYN1P17600 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SYN1P17600 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC15.13■□□□□ 0.01
SYN1P17600 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC15.13■□□□□ 0.01
SYN1P17600 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SYN1P17600 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC15.13■□□□□ 0.01
SYN1P17600 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC15.13■□□□□ 0.01
SYN1P17600 SNX20-205ENST00000610485 557 ntTSL 5 BASIC15.13■□□□□ 0.01
SYN1P17600 AC139100.2-201ENST00000616901 662 ntBASIC15.13■□□□□ 0.01
SYN1P17600 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYN1P17600 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYN1P17600 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYN1P17600 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SYN1P17600 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
SYN1P17600 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYN1P17600 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SYN1P17600 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYN1P17600 AC064801.2-201ENST00000625052 1303 ntBASIC15.13■□□□□ 0.01
SYN1P17600 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.13■□□□□ 0.01
SYN1P17600 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.13■□□□□ 0.01
SYN1P17600 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SYN1P17600 AC091951.1-201ENST00000512854 2465 ntBASIC15.12■□□□□ 0.01
SYN1P17600 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYN1P17600 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYN1P17600 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
SYN1P17600 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYN1P17600 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYN1P17600 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYN1P17600 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYN1P17600 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC15.12■□□□□ 0.01
SYN1P17600 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SYN1P17600 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYN1P17600 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms