Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.22□□□□□ -0.29
PRKCAP17252 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.22□□□□□ -0.29
PRKCAP17252 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.22□□□□□ -0.29
PRKCAP17252 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PRKCAP17252 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
PRKCAP17252 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PRKCAP17252 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PRKCAP17252 AC005962.1-201ENST00000584100 773 ntBASIC13.22□□□□□ -0.29
PRKCAP17252 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PRKCAP17252 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.22□□□□□ -0.29
PRKCAP17252 AL023803.2-201ENST00000620080 638 ntBASIC13.22□□□□□ -0.29
PRKCAP17252 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.22□□□□□ -0.29
PRKCAP17252 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PRKCAP17252 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PRKCAP17252 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
PRKCAP17252 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
PRKCAP17252 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PRKCAP17252 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PRKCAP17252 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PRKCAP17252 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.22□□□□□ -0.29
PRKCAP17252 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PRKCAP17252 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC13.22□□□□□ -0.29
PRKCAP17252 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
PRKCAP17252 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PRKCAP17252 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.22□□□□□ -0.29
PRKCAP17252 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PRKCAP17252 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
PRKCAP17252 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
PRKCAP17252 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
PRKCAP17252 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
PRKCAP17252 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PRKCAP17252 AC016397.2-201ENST00000624848 1985 ntBASIC13.21□□□□□ -0.29
PRKCAP17252 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PRKCAP17252 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PRKCAP17252 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
PRKCAP17252 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
PRKCAP17252 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PRKCAP17252 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PRKCAP17252 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
PRKCAP17252 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.21□□□□□ -0.29
PRKCAP17252 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.21□□□□□ -0.29
PRKCAP17252 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PRKCAP17252 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
PRKCAP17252 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PRKCAP17252 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PRKCAP17252 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
PRKCAP17252 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.21□□□□□ -0.29
PRKCAP17252 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
PRKCAP17252 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PRKCAP17252 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
PRKCAP17252 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PRKCAP17252 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
PRKCAP17252 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PRKCAP17252 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PRKCAP17252 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.21□□□□□ -0.29
PRKCAP17252 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.21□□□□□ -0.29
PRKCAP17252 POM121L10P-201ENST00000436994 1285 ntBASIC13.21□□□□□ -0.29
PRKCAP17252 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.21□□□□□ -0.29
PRKCAP17252 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.21□□□□□ -0.29
PRKCAP17252 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PRKCAP17252 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.21□□□□□ -0.29
PRKCAP17252 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.21□□□□□ -0.29
PRKCAP17252 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PRKCAP17252 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.21□□□□□ -0.29
PRKCAP17252 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.21□□□□□ -0.29
PRKCAP17252 AC104982.3-201ENST00000581995 514 ntBASIC13.21□□□□□ -0.29
PRKCAP17252 AC091271.1-201ENST00000611877 1162 ntBASIC13.21□□□□□ -0.29
PRKCAP17252 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.21□□□□□ -0.29
PRKCAP17252 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
PRKCAP17252 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PRKCAP17252 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
PRKCAP17252 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
PRKCAP17252 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
PRKCAP17252 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
PRKCAP17252 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PRKCAP17252 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PRKCAP17252 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PRKCAP17252 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PRKCAP17252 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.21□□□□□ -0.3
PRKCAP17252 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
PRKCAP17252 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
PRKCAP17252 AC020910.6-201ENST00000623084 1459 ntBASIC13.21□□□□□ -0.3
PRKCAP17252 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.21□□□□□ -0.3
PRKCAP17252 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.21□□□□□ -0.3
PRKCAP17252 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PRKCAP17252 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
PRKCAP17252 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.21□□□□□ -0.3
PRKCAP17252 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
PRKCAP17252 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.21□□□□□ -0.3
PRKCAP17252 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
PRKCAP17252 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PRKCAP17252 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
PRKCAP17252 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.3
PRKCAP17252 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
PRKCAP17252 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PRKCAP17252 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
PRKCAP17252 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PRKCAP17252 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
PRKCAP17252 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
PRKCAP17252 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms