Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PCNAP12004 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PCNAP12004 AL139385.1-201ENST00000611744 3272 ntBASIC13.89□□□□□ -0.19
PCNAP12004 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCNAP12004 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCNAP12004 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCNAP12004 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCNAP12004 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PCNAP12004 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
PCNAP12004 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
PCNAP12004 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCNAP12004 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.89□□□□□ -0.19
PCNAP12004 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PCNAP12004 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCNAP12004 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
PCNAP12004 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.89□□□□□ -0.19
PCNAP12004 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.89□□□□□ -0.19
PCNAP12004 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.89□□□□□ -0.19
PCNAP12004 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.89□□□□□ -0.19
PCNAP12004 AC239800.4-201ENST00000603712 296 ntBASIC13.89□□□□□ -0.19
PCNAP12004 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.89□□□□□ -0.19
PCNAP12004 STRCP1-201ENST00000509801 5328 ntBASIC13.89□□□□□ -0.19
PCNAP12004 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PCNAP12004 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
PCNAP12004 AC015909.5-201ENST00000624336 2266 ntBASIC13.89□□□□□ -0.19
PCNAP12004 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.89□□□□□ -0.19
PCNAP12004 REXO1L6P-201ENST00000603433 1515 ntBASIC13.89□□□□□ -0.19
PCNAP12004 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PCNAP12004 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCNAP12004 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCNAP12004 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PCNAP12004 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
PCNAP12004 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
PCNAP12004 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PCNAP12004 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PCNAP12004 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
PCNAP12004 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.88□□□□□ -0.19
PCNAP12004 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCNAP12004 AC144522.1-201ENST00000625111 1658 ntBASIC13.88□□□□□ -0.19
PCNAP12004 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.88□□□□□ -0.19
PCNAP12004 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCNAP12004 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCNAP12004 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.88□□□□□ -0.19
PCNAP12004 LAP3P2-201ENST00000454686 1454 ntBASIC13.88□□□□□ -0.19
PCNAP12004 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.88□□□□□ -0.19
PCNAP12004 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCNAP12004 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
PCNAP12004 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCNAP12004 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCNAP12004 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.88□□□□□ -0.19
PCNAP12004 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCNAP12004 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCNAP12004 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCNAP12004 AL445209.1-201ENST00000607269 3491 ntBASIC13.88□□□□□ -0.19
PCNAP12004 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCNAP12004 BTBD6P1-201ENST00000412176 1267 ntBASIC13.88□□□□□ -0.19
PCNAP12004 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCNAP12004 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.88□□□□□ -0.19
PCNAP12004 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.88□□□□□ -0.19
PCNAP12004 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.88□□□□□ -0.19
PCNAP12004 ST13P19-201ENST00000442505 1124 ntBASIC13.88□□□□□ -0.19
PCNAP12004 HSPB1P2-201ENST00000448722 546 ntBASIC13.88□□□□□ -0.19
PCNAP12004 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.88□□□□□ -0.19
PCNAP12004 AC006122.1-201ENST00000493323 440 ntBASIC13.88□□□□□ -0.19
PCNAP12004 RPSAP36-202ENST00000494591 1261 ntBASIC13.88□□□□□ -0.19
PCNAP12004 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.88□□□□□ -0.19
PCNAP12004 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.88□□□□□ -0.19
PCNAP12004 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.88□□□□□ -0.19
PCNAP12004 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.88□□□□□ -0.19
PCNAP12004 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.88□□□□□ -0.19
PCNAP12004 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCNAP12004 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.88□□□□□ -0.19
PCNAP12004 AC005730.2-201ENST00000564549 1184 ntBASIC13.88□□□□□ -0.19
PCNAP12004 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCNAP12004 AC124068.2-201ENST00000569473 1109 ntBASIC13.88□□□□□ -0.19
PCNAP12004 AC008805.1-201ENST00000590892 364 ntBASIC13.88□□□□□ -0.19
PCNAP12004 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.88□□□□□ -0.19
PCNAP12004 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PCNAP12004 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCNAP12004 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.88□□□□□ -0.19
PCNAP12004 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCNAP12004 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
PCNAP12004 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
PCNAP12004 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
PCNAP12004 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
PCNAP12004 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCNAP12004 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCNAP12004 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.88□□□□□ -0.19
PCNAP12004 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCNAP12004 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.87□□□□□ -0.19
PCNAP12004 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.87□□□□□ -0.19
PCNAP12004 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.87□□□□□ -0.19
PCNAP12004 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCNAP12004 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
PCNAP12004 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
PCNAP12004 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.87□□□□□ -0.19
PCNAP12004 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.87□□□□□ -0.19
PCNAP12004 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.87□□□□□ -0.19
PCNAP12004 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.87□□□□□ -0.19
PCNAP12004 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms