Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CD28P10747 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC11.11□□□□□ -0.63
CD28P10747 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
CD28P10747 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
CD28P10747 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
CD28P10747 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CD28P10747 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
CD28P10747 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
CD28P10747 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CD28P10747 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CD28P10747 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CD28P10747 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC11.11□□□□□ -0.63
CD28P10747 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
CD28P10747 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CD28P10747 CICP14-201ENST00000629111 2732 ntBASIC11.11□□□□□ -0.63
CD28P10747 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CD28P10747 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC11.11□□□□□ -0.63
CD28P10747 AL591122.2-201ENST00000624125 1853 ntBASIC11.11□□□□□ -0.63
CD28P10747 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
CD28P10747 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
CD28P10747 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
CD28P10747 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
CD28P10747 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CD28P10747 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
CD28P10747 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC11.11□□□□□ -0.63
CD28P10747 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
CD28P10747 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CD28P10747 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CD28P10747 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CD28P10747 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
CD28P10747 RN7SKP109-201ENST00000410592 316 ntBASIC11.11□□□□□ -0.63
CD28P10747 AL355334.1-201ENST00000417713 215 ntBASIC11.11□□□□□ -0.63
CD28P10747 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CD28P10747 AL512306.1-201ENST00000432698 848 ntBASIC11.11□□□□□ -0.63
CD28P10747 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CD28P10747 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC11.11□□□□□ -0.63
CD28P10747 ERP29P1-201ENST00000442902 706 ntBASIC11.11□□□□□ -0.63
CD28P10747 AC004837.1-201ENST00000446267 564 ntBASIC11.11□□□□□ -0.63
CD28P10747 PIN4P1-201ENST00000451079 396 ntBASIC11.11□□□□□ -0.63
CD28P10747 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC11.11□□□□□ -0.63
CD28P10747 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC11.11□□□□□ -0.63
CD28P10747 CTBP2P4-201ENST00000513884 920 ntBASIC11.11□□□□□ -0.63
CD28P10747 AC022447.6-201ENST00000515522 438 ntBASIC11.11□□□□□ -0.63
CD28P10747 IGHV3-37-201ENST00000518544 340 ntBASIC11.11□□□□□ -0.63
CD28P10747 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC11.11□□□□□ -0.63
CD28P10747 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC11.11□□□□□ -0.63
CD28P10747 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC11.11□□□□□ -0.63
CD28P10747 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC11.11□□□□□ -0.63
CD28P10747 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC11.11□□□□□ -0.63
CD28P10747 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC11.11□□□□□ -0.63
CD28P10747 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC11.11□□□□□ -0.63
CD28P10747 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CD28P10747 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CD28P10747 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
CD28P10747 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CD28P10747 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC11.11□□□□□ -0.63
CD28P10747 GRK6P1-201ENST00000400595 1711 ntBASIC11.11□□□□□ -0.63
CD28P10747 INTS4P1-203ENST00000641008 3683 ntBASIC11.11□□□□□ -0.63
CD28P10747 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CD28P10747 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
CD28P10747 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CD28P10747 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
CD28P10747 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CD28P10747 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC11.11□□□□□ -0.63
CD28P10747 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
CD28P10747 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
CD28P10747 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CD28P10747 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CD28P10747 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CD28P10747 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CD28P10747 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CD28P10747 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
CD28P10747 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC11.11□□□□□ -0.63
CD28P10747 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC11.1□□□□□ -0.63
CD28P10747 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
CD28P10747 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CD28P10747 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CD28P10747 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
CD28P10747 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CD28P10747 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC11.1□□□□□ -0.63
CD28P10747 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC11.1□□□□□ -0.63
CD28P10747 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC11.1□□□□□ -0.63
CD28P10747 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CD28P10747 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CD28P10747 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC11.1□□□□□ -0.63
CD28P10747 AC006372.4-201ENST00000624122 1543 ntBASIC11.1□□□□□ -0.63
CD28P10747 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CD28P10747 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CD28P10747 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CD28P10747 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC11.1□□□□□ -0.63
CD28P10747 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC11.1□□□□□ -0.63
CD28P10747 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
CD28P10747 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC11.1□□□□□ -0.63
CD28P10747 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC11.1□□□□□ -0.63
CD28P10747 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC11.1□□□□□ -0.63
CD28P10747 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CD28P10747 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CD28P10747 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC11.1□□□□□ -0.63
CD28P10747 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC11.1□□□□□ -0.63
CD28P10747 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms