Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 AC089987.1-201ENST00000551654 2209 ntBASIC15.75■□□□□ 0.11
CYP3A4P08684 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC15.75■□□□□ 0.11
CYP3A4P08684 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CYP3A4P08684 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.75■□□□□ 0.11
CYP3A4P08684 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CYP3A4P08684 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.74■□□□□ 0.11
CYP3A4P08684 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CYP3A4P08684 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CYP3A4P08684 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CYP3A4P08684 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CYP3A4P08684 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CYP3A4P08684 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.74■□□□□ 0.11
CYP3A4P08684 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CYP3A4P08684 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CYP3A4P08684 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CYP3A4P08684 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC15.74■□□□□ 0.11
CYP3A4P08684 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.74■□□□□ 0.11
CYP3A4P08684 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.74■□□□□ 0.11
CYP3A4P08684 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CYP3A4P08684 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CYP3A4P08684 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CYP3A4P08684 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.74■□□□□ 0.11
CYP3A4P08684 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CYP3A4P08684 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CYP3A4P08684 AC106827.1-201ENST00000366454 431 ntBASIC15.74■□□□□ 0.11
CYP3A4P08684 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CYP3A4P08684 AC073210.1-201ENST00000414799 232 ntBASIC15.74■□□□□ 0.11
CYP3A4P08684 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CYP3A4P08684 HLA-DPB2-205ENST00000435074 1188 ntBASIC15.74■□□□□ 0.11
CYP3A4P08684 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC15.74■□□□□ 0.11
CYP3A4P08684 AC008267.1-201ENST00000474858 1069 ntBASIC15.74■□□□□ 0.11
CYP3A4P08684 RN7SL375P-201ENST00000492442 298 ntBASIC15.74■□□□□ 0.11
CYP3A4P08684 RNA5SP406-201ENST00000516106 112 ntBASIC15.74■□□□□ 0.11
CYP3A4P08684 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC15.74■□□□□ 0.11
CYP3A4P08684 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC15.74■□□□□ 0.11
CYP3A4P08684 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC15.74■□□□□ 0.11
CYP3A4P08684 HELLS-212ENST00000630929 400 ntTSL 5 BASIC15.74■□□□□ 0.11
CYP3A4P08684 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC15.74■□□□□ 0.11
CYP3A4P08684 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CYP3A4P08684 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CYP3A4P08684 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
CYP3A4P08684 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC15.74■□□□□ 0.11
CYP3A4P08684 BEND3P1-201ENST00000421591 1944 ntBASIC15.74■□□□□ 0.11
CYP3A4P08684 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC15.74■□□□□ 0.11
CYP3A4P08684 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CYP3A4P08684 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CYP3A4P08684 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CYP3A4P08684 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CYP3A4P08684 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CYP3A4P08684 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CYP3A4P08684 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CYP3A4P08684 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.73■□□□□ 0.11
CYP3A4P08684 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CYP3A4P08684 CROT-203ENST00000419147 2959 ntTSL 2 BASIC15.73■□□□□ 0.11
CYP3A4P08684 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CYP3A4P08684 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC15.73■□□□□ 0.11
CYP3A4P08684 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CYP3A4P08684 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CYP3A4P08684 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CYP3A4P08684 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
CYP3A4P08684 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CYP3A4P08684 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CYP3A4P08684 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC15.73■□□□□ 0.11
CYP3A4P08684 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CYP3A4P08684 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC15.73■□□□□ 0.11
CYP3A4P08684 LYPLA2P1-203ENST00000447689 696 ntBASIC15.73■□□□□ 0.11
CYP3A4P08684 AC079112.1-201ENST00000454972 939 ntBASIC15.73■□□□□ 0.11
CYP3A4P08684 AC006529.1-201ENST00000459978 637 ntBASIC15.73■□□□□ 0.11
CYP3A4P08684 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC15.73■□□□□ 0.11
CYP3A4P08684 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC15.73■□□□□ 0.11
CYP3A4P08684 RN7SKP155-201ENST00000516031 288 ntBASIC15.73■□□□□ 0.11
CYP3A4P08684 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC15.73■□□□□ 0.11
CYP3A4P08684 BATF-202ENST00000555504 361 ntTSL 2 BASIC15.73■□□□□ 0.11
CYP3A4P08684 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC15.73■□□□□ 0.11
CYP3A4P08684 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CYP3A4P08684 DBP-202ENST00000593500 712 ntTSL 2 BASIC15.73■□□□□ 0.11
CYP3A4P08684 AL356740.1-201ENST00000602192 1297 ntBASIC15.73■□□□□ 0.11
CYP3A4P08684 MIR6858-201ENST00000620733 67 ntBASIC15.73■□□□□ 0.11
CYP3A4P08684 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC15.73■□□□□ 0.11
CYP3A4P08684 AC073911.3-201ENST00000624401 631 ntBASIC15.73■□□□□ 0.11
CYP3A4P08684 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC15.73■□□□□ 0.11
CYP3A4P08684 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC15.73■□□□□ 0.11
CYP3A4P08684 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.73■□□□□ 0.11
CYP3A4P08684 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CYP3A4P08684 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CYP3A4P08684 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CYP3A4P08684 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.73■□□□□ 0.11
CYP3A4P08684 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC15.73■□□□□ 0.11
CYP3A4P08684 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CYP3A4P08684 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC15.73■□□□□ 0.11
CYP3A4P08684 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CYP3A4P08684 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CYP3A4P08684 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.73■□□□□ 0.11
CYP3A4P08684 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CYP3A4P08684 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CYP3A4P08684 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CYP3A4P08684 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CYP3A4P08684 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CYP3A4P08684 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CYP3A4P08684 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms