Protein–RNA interactions for Protein: F8W1W9

NPIPB9, Nuclear pore complex-interacting protein family member B9, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB9F8W1W9 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 COL6A4P2-202ENST00000504443 2753 ntBASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 MIR645-201ENST00000385283 94 ntBASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 PDIA3P2-201ENST00000428073 158 ntBASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 AC006335.1-201ENST00000445200 547 ntBASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 AC099548.2-209ENST00000480264 625 ntBASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 AC024681.1-201ENST00000521917 487 ntBASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 LINC01783-202ENST00000614408 828 ntBASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 BX284668.2-205ENST00000619677 828 ntBASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPB9F8W1W9 AC067750.1-201ENST00000608826 6545 ntBASIC12.88□□□□□ -0.35
NPIPB9F8W1W9 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPB9F8W1W9 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
NPIPB9F8W1W9 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPB9F8W1W9 AL133338.1-201ENST00000565695 1517 ntBASIC12.88□□□□□ -0.35
NPIPB9F8W1W9 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPB9F8W1W9 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.88□□□□□ -0.35
NPIPB9F8W1W9 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPB9F8W1W9 MARK2P16-201ENST00000605714 1723 ntBASIC12.88□□□□□ -0.35
NPIPB9F8W1W9 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPB9F8W1W9 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPB9F8W1W9 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
NPIPB9F8W1W9 AC097376.2-205ENST00000610159 5334 ntBASIC12.88□□□□□ -0.35
NPIPB9F8W1W9 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPB9F8W1W9 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPB9F8W1W9 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPB9F8W1W9 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPB9F8W1W9 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPB9F8W1W9 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC12.88□□□□□ -0.35
NPIPB9F8W1W9 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPB9F8W1W9 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPB9F8W1W9 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPB9F8W1W9 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPB9F8W1W9 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPB9F8W1W9 LINC00265-2P-201ENST00000413372 782 ntBASIC12.88□□□□□ -0.35
NPIPB9F8W1W9 AC073869.2-201ENST00000417338 1026 ntBASIC12.88□□□□□ -0.35
NPIPB9F8W1W9 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC12.88□□□□□ -0.35
NPIPB9F8W1W9 KRTAP19-9P-201ENST00000421795 191 ntBASIC12.88□□□□□ -0.35
NPIPB9F8W1W9 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPB9F8W1W9 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC12.88□□□□□ -0.35
NPIPB9F8W1W9 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC12.88□□□□□ -0.35
NPIPB9F8W1W9 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC12.88□□□□□ -0.35
NPIPB9F8W1W9 RN7SL258P-201ENST00000478664 300 ntBASIC12.88□□□□□ -0.35
NPIPB9F8W1W9 AC114947.1-202ENST00000514136 344 ntBASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms