Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CFAP99D6REC4 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CFAP99D6REC4 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CFAP99D6REC4 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CFAP99D6REC4 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.27□□□□□ -0.13
CFAP99D6REC4 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CFAP99D6REC4 AC016397.2-201ENST00000624848 1985 ntBASIC14.27□□□□□ -0.13
CFAP99D6REC4 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CFAP99D6REC4 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CFAP99D6REC4 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
CFAP99D6REC4 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CFAP99D6REC4 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CFAP99D6REC4 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CFAP99D6REC4 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CFAP99D6REC4 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC14.27□□□□□ -0.13
CFAP99D6REC4 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CFAP99D6REC4 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CFAP99D6REC4 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP99D6REC4 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP99D6REC4 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP99D6REC4 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.26□□□□□ -0.13
CFAP99D6REC4 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP99D6REC4 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP99D6REC4 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP99D6REC4 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP99D6REC4 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CFAP99D6REC4 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP99D6REC4 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP99D6REC4 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP99D6REC4 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP99D6REC4 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CFAP99D6REC4 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP99D6REC4 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.26□□□□□ -0.13
CFAP99D6REC4 AL008707.1-201ENST00000422498 534 ntBASIC14.26□□□□□ -0.13
CFAP99D6REC4 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.26□□□□□ -0.13
CFAP99D6REC4 NKAIN1P1-201ENST00000435754 582 ntBASIC14.26□□□□□ -0.13
CFAP99D6REC4 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.26□□□□□ -0.13
CFAP99D6REC4 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.26□□□□□ -0.13
CFAP99D6REC4 RCC2P8-201ENST00000502779 1035 ntBASIC14.26□□□□□ -0.13
CFAP99D6REC4 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.26□□□□□ -0.13
CFAP99D6REC4 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.26□□□□□ -0.13
CFAP99D6REC4 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.26□□□□□ -0.13
CFAP99D6REC4 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.26□□□□□ -0.13
CFAP99D6REC4 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.26□□□□□ -0.13
CFAP99D6REC4 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP99D6REC4 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP99D6REC4 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP99D6REC4 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP99D6REC4 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CFAP99D6REC4 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP99D6REC4 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP99D6REC4 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP99D6REC4 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.26□□□□□ -0.13
CFAP99D6REC4 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.26□□□□□ -0.13
CFAP99D6REC4 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.26□□□□□ -0.13
CFAP99D6REC4 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP99D6REC4 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP99D6REC4 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP99D6REC4 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP99D6REC4 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CFAP99D6REC4 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
CFAP99D6REC4 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CFAP99D6REC4 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CFAP99D6REC4 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CFAP99D6REC4 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.25□□□□□ -0.13
CFAP99D6REC4 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.25□□□□□ -0.13
CFAP99D6REC4 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.25□□□□□ -0.13
CFAP99D6REC4 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.25□□□□□ -0.13
CFAP99D6REC4 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CFAP99D6REC4 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CFAP99D6REC4 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.25□□□□□ -0.13
CFAP99D6REC4 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CFAP99D6REC4 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CFAP99D6REC4 CASC19-229ENST00000641418 1373 ntBASIC14.25□□□□□ -0.13
CFAP99D6REC4 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.25□□□□□ -0.13
CFAP99D6REC4 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CFAP99D6REC4 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.25□□□□□ -0.13
CFAP99D6REC4 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
CFAP99D6REC4 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
CFAP99D6REC4 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.25□□□□□ -0.13
CFAP99D6REC4 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CFAP99D6REC4 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CFAP99D6REC4 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CFAP99D6REC4 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CFAP99D6REC4 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CFAP99D6REC4 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.25□□□□□ -0.13
CFAP99D6REC4 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CFAP99D6REC4 KRT8P13-201ENST00000463294 1010 ntBASIC14.25□□□□□ -0.13
CFAP99D6REC4 AC125604.1-201ENST00000496255 707 ntBASIC14.25□□□□□ -0.13
CFAP99D6REC4 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.25□□□□□ -0.13
CFAP99D6REC4 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.25□□□□□ -0.13
CFAP99D6REC4 AL451050.2-201ENST00000606967 682 ntBASIC14.25□□□□□ -0.13
CFAP99D6REC4 MIR6799-201ENST00000620297 69 ntBASIC14.25□□□□□ -0.13
CFAP99D6REC4 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
CFAP99D6REC4 NAP1L6-202ENST00000641404 1222 ntBASIC14.25□□□□□ -0.13
CFAP99D6REC4 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CFAP99D6REC4 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CFAP99D6REC4 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CFAP99D6REC4 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CFAP99D6REC4 AL022313.4-201ENST00000562756 2046 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms