Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 OR6M1-201ENST00000309154 1053 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 ALMS1P1-201ENST00000428767 921 ntBASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 HAX1-204ENST00000457918 914 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 AC104521.1-201ENST00000598582 279 ntTSL 5 BASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 AC092535.4-201ENST00000609548 397 ntBASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 MIR6871-201ENST00000613433 56 ntBASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM88BA6NKF7 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16■□□□□ 0.15
TMEM88BA6NKF7 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM88BA6NKF7 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TMEM88BA6NKF7 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM88BA6NKF7 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC16■□□□□ 0.15
TMEM88BA6NKF7 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC16■□□□□ 0.15
TMEM88BA6NKF7 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM88BA6NKF7 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC16■□□□□ 0.15
TMEM88BA6NKF7 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM88BA6NKF7 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC16■□□□□ 0.15
TMEM88BA6NKF7 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC16■□□□□ 0.15
TMEM88BA6NKF7 AC011997.1-201ENST00000409845 1032 ntTSL 1 (best) BASIC16■□□□□ 0.15
TMEM88BA6NKF7 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
TMEM88BA6NKF7 RN7SL646P-201ENST00000492969 297 ntBASIC16■□□□□ 0.15
TMEM88BA6NKF7 AC246817.2-204ENST00000517984 562 ntTSL 4 BASIC16■□□□□ 0.15
TMEM88BA6NKF7 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC16■□□□□ 0.15
TMEM88BA6NKF7 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC16■□□□□ 0.15
TMEM88BA6NKF7 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM88BA6NKF7 AC011479.2-201ENST00000598146 432 ntTSL 3 BASIC16■□□□□ 0.15
TMEM88BA6NKF7 MDC1-209ENST00000613547 830 ntTSL 5 BASIC16■□□□□ 0.15
TMEM88BA6NKF7 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC16■□□□□ 0.15
TMEM88BA6NKF7 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC16■□□□□ 0.15
TMEM88BA6NKF7 PAX6-247ENST00000638965 979 ntTSL 5 BASIC16■□□□□ 0.15
TMEM88BA6NKF7 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16■□□□□ 0.15
TMEM88BA6NKF7 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TMEM88BA6NKF7 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM88BA6NKF7 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM88BA6NKF7 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM88BA6NKF7 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16■□□□□ 0.15
TMEM88BA6NKF7 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC16■□□□□ 0.15
TMEM88BA6NKF7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM88BA6NKF7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM88BA6NKF7 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16■□□□□ 0.15
TMEM88BA6NKF7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16■□□□□ 0.15
TMEM88BA6NKF7 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16■□□□□ 0.15
TMEM88BA6NKF7 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM88BA6NKF7 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
TMEM88BA6NKF7 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC16■□□□□ 0.15
TMEM88BA6NKF7 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 CLK2P1-201ENST00000416636 1294 ntBASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 AC010395.2-201ENST00000509899 904 ntBASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 AC105424.1-201ENST00000514583 209 ntBASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 AC027279.2-201ENST00000561938 793 ntTSL 5 BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 RN7SL162P-201ENST00000579233 292 ntBASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 LINC02427-202ENST00000605270 1059 ntTSL 2 BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms