Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 ELK1P1-201ENST00000485699 580 ntBASIC15.47■□□□□ 0.07
CCDC66A2RUB6 ALG3P1-201ENST00000508806 1114 ntBASIC15.47■□□□□ 0.07
CCDC66A2RUB6 SORD2P-201ENST00000558556 1069 ntBASIC15.47■□□□□ 0.07
CCDC66A2RUB6 RN7SL204P-201ENST00000582831 262 ntBASIC15.47■□□□□ 0.07
CCDC66A2RUB6 LINC02560-201ENST00000596379 459 ntBASIC15.47■□□□□ 0.07
CCDC66A2RUB6 AC004233.3-201ENST00000607794 1269 ntBASIC15.47■□□□□ 0.07
CCDC66A2RUB6 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 AC026992.2-203ENST00000563004 2419 ntBASIC15.47■□□□□ 0.07
CCDC66A2RUB6 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 Z98257.2-202ENST00000641138 1548 ntBASIC15.47■□□□□ 0.07
CCDC66A2RUB6 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC66A2RUB6 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC66A2RUB6 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC66A2RUB6 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
CCDC66A2RUB6 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC15.46■□□□□ 0.07
CCDC66A2RUB6 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC66A2RUB6 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CCDC66A2RUB6 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC66A2RUB6 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC66A2RUB6 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC66A2RUB6 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC15.46■□□□□ 0.07
CCDC66A2RUB6 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC66A2RUB6 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC66A2RUB6 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC66A2RUB6 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC66A2RUB6 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CCDC66A2RUB6 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC66A2RUB6 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC66A2RUB6 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC66A2RUB6 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC66A2RUB6 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.46■□□□□ 0.07
CCDC66A2RUB6 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.46■□□□□ 0.07
CCDC66A2RUB6 AC002472.2-201ENST00000442739 958 ntBASIC15.46■□□□□ 0.07
CCDC66A2RUB6 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC66A2RUB6 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.46■□□□□ 0.07
CCDC66A2RUB6 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.46■□□□□ 0.07
CCDC66A2RUB6 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CCDC66A2RUB6 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CCDC66A2RUB6 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CCDC66A2RUB6 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC15.46■□□□□ 0.07
CCDC66A2RUB6 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.46■□□□□ 0.07
CCDC66A2RUB6 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC66A2RUB6 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.46■□□□□ 0.07
CCDC66A2RUB6 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC66A2RUB6 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
CCDC66A2RUB6 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
CCDC66A2RUB6 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC15.46■□□□□ 0.06
CCDC66A2RUB6 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CCDC66A2RUB6 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.06
CCDC66A2RUB6 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
CCDC66A2RUB6 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CCDC66A2RUB6 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC66A2RUB6 AL590440.2-201ENST00000641973 1595 ntBASIC15.45■□□□□ 0.06
CCDC66A2RUB6 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC66A2RUB6 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC15.45■□□□□ 0.06
CCDC66A2RUB6 PTPRVP-205ENST00000641549 5067 ntBASIC15.45■□□□□ 0.06
CCDC66A2RUB6 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC66A2RUB6 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC15.45■□□□□ 0.06
CCDC66A2RUB6 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC66A2RUB6 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC66A2RUB6 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC15.45■□□□□ 0.06
CCDC66A2RUB6 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC66A2RUB6 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC66A2RUB6 AC090643.2-201ENST00000623442 2029 ntBASIC15.45■□□□□ 0.06
CCDC66A2RUB6 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC15.45■□□□□ 0.06
CCDC66A2RUB6 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CCDC66A2RUB6 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC15.45■□□□□ 0.06
CCDC66A2RUB6 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC66A2RUB6 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC66A2RUB6 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC66A2RUB6 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.45■□□□□ 0.06
CCDC66A2RUB6 MIR661-201ENST00000384842 89 ntBASIC15.45■□□□□ 0.06
CCDC66A2RUB6 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC66A2RUB6 POM121L8P-201ENST00000417732 1281 ntBASIC15.45■□□□□ 0.06
CCDC66A2RUB6 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC66A2RUB6 POM121L9P-203ENST00000441984 1285 ntBASIC15.45■□□□□ 0.06
CCDC66A2RUB6 FAM207CP-201ENST00000443486 507 ntBASIC15.45■□□□□ 0.06
CCDC66A2RUB6 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.45■□□□□ 0.06
CCDC66A2RUB6 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.45■□□□□ 0.06
CCDC66A2RUB6 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.45■□□□□ 0.06
CCDC66A2RUB6 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.45■□□□□ 0.06
CCDC66A2RUB6 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.45■□□□□ 0.06
CCDC66A2RUB6 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC66A2RUB6 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.45■□□□□ 0.06
CCDC66A2RUB6 AC138466.3-201ENST00000619983 221 ntBASIC15.45■□□□□ 0.06
CCDC66A2RUB6 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms