Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 UFM1-202ENST00000379649 846 ntTSL 4 BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL4A3BPQ9Y5P4 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
COL4A3BPQ9Y5P4 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
COL4A3BPQ9Y5P4 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
COL4A3BPQ9Y5P4 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 LINC02486-201ENST00000604157 3000 ntBASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 AL583805.1-201ENST00000391389 531 ntBASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 AC092506.1-202ENST00000401022 528 ntBASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 AP000358.1-201ENST00000456260 156 ntBASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 AC019193.1-201ENST00000506678 823 ntBASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 KRT8P1-201ENST00000557533 1207 ntBASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 COG4-212ENST00000564653 590 ntTSL 5 BASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 LINC00115-201ENST00000473798 1317 ntBASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 USP39-207ENST00000450066 2086 ntTSL 2 BASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 KRT8P31-201ENST00000504812 1408 ntBASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 LINC01815-202ENST00000641468 1409 ntBASIC15.83■□□□□ 0.12
COL4A3BPQ9Y5P4 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms