Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SHANK2Q9UPX8 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHANK2Q9UPX8 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC20.35■□□□□ 0.85
SHANK2Q9UPX8 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC20.35■□□□□ 0.85
SHANK2Q9UPX8 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC20.35■□□□□ 0.85
SHANK2Q9UPX8 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SHANK2Q9UPX8 AHCYP3-201ENST00000420053 1279 ntBASIC20.35■□□□□ 0.85
SHANK2Q9UPX8 RPE-208ENST00000436630 1128 ntTSL 2 BASIC20.35■□□□□ 0.85
SHANK2Q9UPX8 RPL35P1-201ENST00000450819 370 ntBASIC20.35■□□□□ 0.85
SHANK2Q9UPX8 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHANK2Q9UPX8 AC093700.1-201ENST00000503348 717 ntBASIC20.35■□□□□ 0.85
SHANK2Q9UPX8 RPSAP70-201ENST00000504462 864 ntBASIC20.35■□□□□ 0.85
SHANK2Q9UPX8 GRAMD4P6-201ENST00000556999 244 ntBASIC20.35■□□□□ 0.85
SHANK2Q9UPX8 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC20.35■□□□□ 0.85
SHANK2Q9UPX8 AC091304.3-201ENST00000566500 716 ntBASIC20.35■□□□□ 0.85
SHANK2Q9UPX8 MIR4254-201ENST00000581063 76 ntBASIC20.35■□□□□ 0.85
SHANK2Q9UPX8 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC20.35■□□□□ 0.85
SHANK2Q9UPX8 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 MARK2P9-201ENST00000430958 1727 ntBASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 AC010202.1-201ENST00000551181 405 ntBASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 JPT2-214ENST00000569765 782 ntTSL 2 BASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC20.34■□□□□ 0.85
SHANK2Q9UPX8 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SHANK2Q9UPX8 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SHANK2Q9UPX8 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC20.33■□□□□ 0.85
SHANK2Q9UPX8 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
SHANK2Q9UPX8 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
SHANK2Q9UPX8 LINC02486-201ENST00000604157 3000 ntBASIC20.33■□□□□ 0.85
SHANK2Q9UPX8 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SHANK2Q9UPX8 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
SHANK2Q9UPX8 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC20.33■□□□□ 0.85
SHANK2Q9UPX8 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC20.33■□□□□ 0.85
SHANK2Q9UPX8 FAU-201ENST00000279259 461 ntTSL 2 BASIC20.33■□□□□ 0.85
SHANK2Q9UPX8 JPT2-203ENST00000382711 894 ntTSL 4 BASIC20.33■□□□□ 0.85
SHANK2Q9UPX8 MIR632-201ENST00000385193 94 ntBASIC20.33■□□□□ 0.85
SHANK2Q9UPX8 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SHANK2Q9UPX8 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC20.33■□□□□ 0.85
SHANK2Q9UPX8 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC20.33■□□□□ 0.85
SHANK2Q9UPX8 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC20.33■□□□□ 0.85
SHANK2Q9UPX8 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC20.33■□□□□ 0.85
SHANK2Q9UPX8 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC20.33■□□□□ 0.85
SHANK2Q9UPX8 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC20.33■□□□□ 0.85
SHANK2Q9UPX8 NEK4P3-201ENST00000604859 544 ntBASIC20.33■□□□□ 0.85
SHANK2Q9UPX8 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
SHANK2Q9UPX8 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SHANK2Q9UPX8 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC20.33■□□□□ 0.85
SHANK2Q9UPX8 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC20.33■□□□□ 0.85
SHANK2Q9UPX8 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SHANK2Q9UPX8 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SHANK2Q9UPX8 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC20.33■□□□□ 0.85
SHANK2Q9UPX8 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SHANK2Q9UPX8 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
SHANK2Q9UPX8 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHANK2Q9UPX8 AC027601.5-201ENST00000624065 2482 ntBASIC20.33■□□□□ 0.84
SHANK2Q9UPX8 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
SHANK2Q9UPX8 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHANK2Q9UPX8 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHANK2Q9UPX8 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
SHANK2Q9UPX8 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC20.33■□□□□ 0.84
SHANK2Q9UPX8 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHANK2Q9UPX8 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 INTS4P1-203ENST00000641008 3683 ntBASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms