Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CLIP2Q9UDT6 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.84■□□□□ 0.29
CLIP2Q9UDT6 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.84■□□□□ 0.29
CLIP2Q9UDT6 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC16.84■□□□□ 0.29
CLIP2Q9UDT6 SIGLEC18P-201ENST00000602271 909 ntBASIC16.84■□□□□ 0.29
CLIP2Q9UDT6 AC104506.1-201ENST00000609247 429 ntBASIC16.84■□□□□ 0.29
CLIP2Q9UDT6 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.84■□□□□ 0.29
CLIP2Q9UDT6 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLIP2Q9UDT6 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC16.84■□□□□ 0.29
CLIP2Q9UDT6 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CLIP2Q9UDT6 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLIP2Q9UDT6 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.84■□□□□ 0.29
CLIP2Q9UDT6 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.84■□□□□ 0.29
CLIP2Q9UDT6 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLIP2Q9UDT6 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CLIP2Q9UDT6 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLIP2Q9UDT6 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC16.84■□□□□ 0.29
CLIP2Q9UDT6 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLIP2Q9UDT6 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CLIP2Q9UDT6 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLIP2Q9UDT6 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLIP2Q9UDT6 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC16.84■□□□□ 0.29
CLIP2Q9UDT6 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC16.84■□□□□ 0.29
CLIP2Q9UDT6 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLIP2Q9UDT6 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLIP2Q9UDT6 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLIP2Q9UDT6 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLIP2Q9UDT6 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 AC026316.1-201ENST00000398900 414 ntBASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 MIR4706-201ENST00000582134 82 ntBASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 AC006480.2-201ENST00000609770 1337 ntBASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 PPT1-213ENST00000641319 2388 ntBASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC16.83■□□□□ 0.28
CLIP2Q9UDT6 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 BRD7P5-201ENST00000299197 1822 ntBASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 MIR33B-201ENST00000385104 96 ntBASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 AL807761.2-201ENST00000422849 729 ntBASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 AL592076.1-201ENST00000424448 303 ntBASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 NAGK-204ENST00000443872 878 ntTSL 3 BASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 DUTP3-201ENST00000450025 415 ntBASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 AC103810.10-201ENST00000606504 343 ntBASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 AC051619.9-201ENST00000623237 597 ntBASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms