Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC17.1■□□□□ 0.33
RPAP1Q9BWH6 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC17.1■□□□□ 0.33
RPAP1Q9BWH6 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC17.1■□□□□ 0.33
RPAP1Q9BWH6 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RPAP1Q9BWH6 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPAP1Q9BWH6 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 RN7SL665P-201ENST00000578793 300 ntBASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 RN7SL470P-201ENST00000583069 259 ntBASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 CNTNAP3P2-201ENST00000617175 3861 ntBASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 AC015909.5-201ENST00000624336 2266 ntBASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPAP1Q9BWH6 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RPAP1Q9BWH6 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RPAP1Q9BWH6 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RPAP1Q9BWH6 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
RPAP1Q9BWH6 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC17.08■□□□□ 0.33
RPAP1Q9BWH6 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
RPAP1Q9BWH6 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
RPAP1Q9BWH6 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RPAP1Q9BWH6 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC17.08■□□□□ 0.32
RPAP1Q9BWH6 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RPAP1Q9BWH6 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RPAP1Q9BWH6 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RPAP1Q9BWH6 Z69890.1-201ENST00000382990 339 ntBASIC17.08■□□□□ 0.32
RPAP1Q9BWH6 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RPAP1Q9BWH6 OR8T1P-201ENST00000421347 918 ntBASIC17.08■□□□□ 0.32
RPAP1Q9BWH6 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC17.08■□□□□ 0.32
RPAP1Q9BWH6 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC17.08■□□□□ 0.32
RPAP1Q9BWH6 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC17.08■□□□□ 0.32
RPAP1Q9BWH6 RPL18AP8-201ENST00000486071 528 ntBASIC17.08■□□□□ 0.32
RPAP1Q9BWH6 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC17.08■□□□□ 0.32
RPAP1Q9BWH6 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC17.08■□□□□ 0.32
RPAP1Q9BWH6 ALG1L13P-202ENST00000519320 584 ntBASIC17.08■□□□□ 0.32
RPAP1Q9BWH6 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
RPAP1Q9BWH6 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RPAP1Q9BWH6 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC17.08■□□□□ 0.32
RPAP1Q9BWH6 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC17.08■□□□□ 0.32
RPAP1Q9BWH6 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC17.08■□□□□ 0.32
RPAP1Q9BWH6 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC17.08■□□□□ 0.32
RPAP1Q9BWH6 SIGLEC22P-201ENST00000599104 714 ntBASIC17.08■□□□□ 0.32
RPAP1Q9BWH6 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC17.08■□□□□ 0.32
RPAP1Q9BWH6 AC138466.5-201ENST00000624002 808 ntBASIC17.08■□□□□ 0.32
RPAP1Q9BWH6 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC17.08■□□□□ 0.32
RPAP1Q9BWH6 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
RPAP1Q9BWH6 DGCR9-201ENST00000609630 2415 ntBASIC17.08■□□□□ 0.32
RPAP1Q9BWH6 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
RPAP1Q9BWH6 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC17.08■□□□□ 0.32
RPAP1Q9BWH6 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RPAP1Q9BWH6 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RPAP1Q9BWH6 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC17.08■□□□□ 0.32
RPAP1Q9BWH6 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 ERP29P1-201ENST00000442902 706 ntBASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
RPAP1Q9BWH6 MIR3180-2-201ENST00000581748 88 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms