Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC015936.2-201ENST00000593177 259 ntBASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 MIR6720-201ENST00000611664 98 ntBASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HDHD3Q9BSH5 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12□□□□□ -0.49
HDHD3Q9BSH5 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
HDHD3Q9BSH5 TNRC18P1-201ENST00000502875 3650 ntBASIC12□□□□□ -0.49
HDHD3Q9BSH5 AC244394.1-201ENST00000435000 1665 ntBASIC12□□□□□ -0.49
HDHD3Q9BSH5 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12□□□□□ -0.49
HDHD3Q9BSH5 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
HDHD3Q9BSH5 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HDHD3Q9BSH5 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HDHD3Q9BSH5 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HDHD3Q9BSH5 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
HDHD3Q9BSH5 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12□□□□□ -0.49
HDHD3Q9BSH5 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
HDHD3Q9BSH5 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
HDHD3Q9BSH5 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12□□□□□ -0.49
HDHD3Q9BSH5 LINC00638-201ENST00000555578 2518 ntBASIC12□□□□□ -0.49
HDHD3Q9BSH5 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HDHD3Q9BSH5 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
HDHD3Q9BSH5 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HDHD3Q9BSH5 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
HDHD3Q9BSH5 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12□□□□□ -0.49
HDHD3Q9BSH5 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
HDHD3Q9BSH5 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12□□□□□ -0.49
HDHD3Q9BSH5 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HDHD3Q9BSH5 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
HDHD3Q9BSH5 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
HDHD3Q9BSH5 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12□□□□□ -0.49
HDHD3Q9BSH5 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
HDHD3Q9BSH5 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12□□□□□ -0.49
HDHD3Q9BSH5 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12□□□□□ -0.49
HDHD3Q9BSH5 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
HDHD3Q9BSH5 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12□□□□□ -0.49
HDHD3Q9BSH5 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12□□□□□ -0.49
HDHD3Q9BSH5 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
HDHD3Q9BSH5 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12□□□□□ -0.49
HDHD3Q9BSH5 C2orf69P2-201ENST00000562032 1123 ntBASIC12□□□□□ -0.49
HDHD3Q9BSH5 AP006547.1-201ENST00000563435 692 ntBASIC12□□□□□ -0.49
HDHD3Q9BSH5 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
HDHD3Q9BSH5 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
HDHD3Q9BSH5 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12□□□□□ -0.49
HDHD3Q9BSH5 AL591163.1-201ENST00000641757 987 ntBASIC12□□□□□ -0.49
HDHD3Q9BSH5 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
HDHD3Q9BSH5 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
HDHD3Q9BSH5 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
HDHD3Q9BSH5 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HDHD3Q9BSH5 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12□□□□□ -0.49
HDHD3Q9BSH5 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HDHD3Q9BSH5 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12□□□□□ -0.49
HDHD3Q9BSH5 AC061965.1-201ENST00000560524 1465 ntBASIC12□□□□□ -0.49
HDHD3Q9BSH5 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12□□□□□ -0.49
HDHD3Q9BSH5 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HDHD3Q9BSH5 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12□□□□□ -0.49
HDHD3Q9BSH5 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HDHD3Q9BSH5 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HDHD3Q9BSH5 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
HDHD3Q9BSH5 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HDHD3Q9BSH5 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HDHD3Q9BSH5 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12□□□□□ -0.49
HDHD3Q9BSH5 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
HDHD3Q9BSH5 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12□□□□□ -0.49
HDHD3Q9BSH5 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12□□□□□ -0.49
HDHD3Q9BSH5 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HDHD3Q9BSH5 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12□□□□□ -0.49
HDHD3Q9BSH5 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HDHD3Q9BSH5 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
HDHD3Q9BSH5 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12□□□□□ -0.49
HDHD3Q9BSH5 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12□□□□□ -0.49
HDHD3Q9BSH5 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
HDHD3Q9BSH5 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HDHD3Q9BSH5 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms