Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
VGLL1Q99990 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC10.83□□□□□ -0.68
VGLL1Q99990 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC10.83□□□□□ -0.68
VGLL1Q99990 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VGLL1Q99990 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
VGLL1Q99990 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
VGLL1Q99990 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
VGLL1Q99990 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
VGLL1Q99990 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC10.83□□□□□ -0.68
VGLL1Q99990 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VGLL1Q99990 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC10.83□□□□□ -0.68
VGLL1Q99990 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
VGLL1Q99990 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
VGLL1Q99990 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VGLL1Q99990 AC011700.1-201ENST00000610409 2627 ntBASIC10.83□□□□□ -0.68
VGLL1Q99990 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VGLL1Q99990 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VGLL1Q99990 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VGLL1Q99990 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
VGLL1Q99990 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
VGLL1Q99990 GUK1-206ENST00000366723 845 ntTSL 5 BASIC10.83□□□□□ -0.68
VGLL1Q99990 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
VGLL1Q99990 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VGLL1Q99990 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VGLL1Q99990 RPL28-203ENST00000428193 573 ntTSL 2 BASIC10.83□□□□□ -0.68
VGLL1Q99990 RPL28-204ENST00000431533 590 ntTSL 2 BASIC10.83□□□□□ -0.68
VGLL1Q99990 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
VGLL1Q99990 AL355864.2-201ENST00000447420 863 ntBASIC10.83□□□□□ -0.68
VGLL1Q99990 TERF1P3-201ENST00000505638 1227 ntBASIC10.83□□□□□ -0.68
VGLL1Q99990 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC10.83□□□□□ -0.68
VGLL1Q99990 RNA5SP486-201ENST00000515961 83 ntBASIC10.83□□□□□ -0.68
VGLL1Q99990 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC10.83□□□□□ -0.68
VGLL1Q99990 AP001889.1-201ENST00000525414 633 ntBASIC10.83□□□□□ -0.68
VGLL1Q99990 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC10.83□□□□□ -0.68
VGLL1Q99990 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC10.83□□□□□ -0.68
VGLL1Q99990 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC10.83□□□□□ -0.68
VGLL1Q99990 AC190387.1-201ENST00000551683 408 ntBASIC10.83□□□□□ -0.68
VGLL1Q99990 RPL28-207ENST00000558815 616 ntTSL 2 BASIC10.83□□□□□ -0.68
VGLL1Q99990 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
VGLL1Q99990 YTHDF3-AS1-201ENST00000603538 718 ntBASIC10.83□□□□□ -0.68
VGLL1Q99990 AL355385.1-201ENST00000606123 409 ntBASIC10.83□□□□□ -0.68
VGLL1Q99990 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC10.83□□□□□ -0.68
VGLL1Q99990 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
VGLL1Q99990 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
VGLL1Q99990 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC10.83□□□□□ -0.68
VGLL1Q99990 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC10.83□□□□□ -0.68
VGLL1Q99990 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC10.83□□□□□ -0.68
VGLL1Q99990 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
VGLL1Q99990 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VGLL1Q99990 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
VGLL1Q99990 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
VGLL1Q99990 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
VGLL1Q99990 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC10.83□□□□□ -0.68
VGLL1Q99990 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
VGLL1Q99990 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
VGLL1Q99990 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
VGLL1Q99990 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VGLL1Q99990 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC10.83□□□□□ -0.68
VGLL1Q99990 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC10.83□□□□□ -0.68
VGLL1Q99990 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
VGLL1Q99990 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC10.83□□□□□ -0.68
VGLL1Q99990 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
VGLL1Q99990 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VGLL1Q99990 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VGLL1Q99990 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC10.83□□□□□ -0.68
VGLL1Q99990 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
VGLL1Q99990 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VGLL1Q99990 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
VGLL1Q99990 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
VGLL1Q99990 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC10.82□□□□□ -0.68
VGLL1Q99990 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC10.82□□□□□ -0.68
VGLL1Q99990 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
VGLL1Q99990 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VGLL1Q99990 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC10.82□□□□□ -0.68
VGLL1Q99990 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VGLL1Q99990 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC10.82□□□□□ -0.68
VGLL1Q99990 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
VGLL1Q99990 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
VGLL1Q99990 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
VGLL1Q99990 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC10.82□□□□□ -0.68
VGLL1Q99990 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
VGLL1Q99990 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
VGLL1Q99990 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VGLL1Q99990 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VGLL1Q99990 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC10.82□□□□□ -0.68
VGLL1Q99990 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC10.82□□□□□ -0.68
VGLL1Q99990 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
VGLL1Q99990 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
VGLL1Q99990 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC10.82□□□□□ -0.68
VGLL1Q99990 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
VGLL1Q99990 MARK2P9-201ENST00000430958 1727 ntBASIC10.82□□□□□ -0.68
VGLL1Q99990 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC10.82□□□□□ -0.68
VGLL1Q99990 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
VGLL1Q99990 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
VGLL1Q99990 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VGLL1Q99990 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VGLL1Q99990 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VGLL1Q99990 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VGLL1Q99990 AC236430.1-201ENST00000402231 743 ntBASIC10.82□□□□□ -0.68
VGLL1Q99990 MPV17-205ENST00000402310 906 ntTSL 5 BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms