Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EYA3Q99504 AP001267.2-201ENST00000532619 2086 ntBASIC17.01■□□□□ 0.31
EYA3Q99504 LINC02228-204ENST00000642115 2962 ntBASIC17.01■□□□□ 0.31
EYA3Q99504 AC106881.1-201ENST00000605849 3329 ntBASIC17.01■□□□□ 0.31
EYA3Q99504 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC17.01■□□□□ 0.31
EYA3Q99504 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
EYA3Q99504 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
EYA3Q99504 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
EYA3Q99504 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EYA3Q99504 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.01■□□□□ 0.31
EYA3Q99504 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.01■□□□□ 0.31
EYA3Q99504 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
EYA3Q99504 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
EYA3Q99504 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC17.01■□□□□ 0.31
EYA3Q99504 AL080243.1-201ENST00000423293 1060 ntBASIC17.01■□□□□ 0.31
EYA3Q99504 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
EYA3Q99504 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC17.01■□□□□ 0.31
EYA3Q99504 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC17.01■□□□□ 0.31
EYA3Q99504 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
EYA3Q99504 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
EYA3Q99504 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC17.01■□□□□ 0.31
EYA3Q99504 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
EYA3Q99504 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
EYA3Q99504 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
EYA3Q99504 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
EYA3Q99504 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
EYA3Q99504 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
EYA3Q99504 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
EYA3Q99504 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EYA3Q99504 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
EYA3Q99504 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
EYA3Q99504 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
EYA3Q99504 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC17.01■□□□□ 0.31
EYA3Q99504 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
EYA3Q99504 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC17.01■□□□□ 0.31
EYA3Q99504 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC17.01■□□□□ 0.31
EYA3Q99504 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
EYA3Q99504 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EYA3Q99504 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EYA3Q99504 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
EYA3Q99504 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EYA3Q99504 AL390755.1-201ENST00000623716 2027 ntBASIC17.01■□□□□ 0.31
EYA3Q99504 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EYA3Q99504 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
EYA3Q99504 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EYA3Q99504 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EYA3Q99504 AC140479.7-201ENST00000636301 2332 ntBASIC17.01■□□□□ 0.31
EYA3Q99504 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EYA3Q99504 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
EYA3Q99504 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC17■□□□□ 0.31
EYA3Q99504 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
EYA3Q99504 AC015909.5-201ENST00000624336 2266 ntBASIC17■□□□□ 0.31
EYA3Q99504 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17■□□□□ 0.31
EYA3Q99504 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC17■□□□□ 0.31
EYA3Q99504 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
EYA3Q99504 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
EYA3Q99504 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
EYA3Q99504 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC17■□□□□ 0.31
EYA3Q99504 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17■□□□□ 0.31
EYA3Q99504 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
EYA3Q99504 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
EYA3Q99504 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
EYA3Q99504 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC17■□□□□ 0.31
EYA3Q99504 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17■□□□□ 0.31
EYA3Q99504 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
EYA3Q99504 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC17■□□□□ 0.31
EYA3Q99504 HNRNPA1P58-201ENST00000403629 610 ntBASIC17■□□□□ 0.31
EYA3Q99504 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC17■□□□□ 0.31
EYA3Q99504 HNRNPA1P2-207ENST00000432375 960 ntBASIC17■□□□□ 0.31
EYA3Q99504 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
EYA3Q99504 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC17■□□□□ 0.31
EYA3Q99504 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
EYA3Q99504 NALT1-202ENST00000450304 437 ntTSL 3 BASIC17■□□□□ 0.31
EYA3Q99504 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
EYA3Q99504 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC17■□□□□ 0.31
EYA3Q99504 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC17■□□□□ 0.31
EYA3Q99504 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC17■□□□□ 0.31
EYA3Q99504 AC023968.2-201ENST00000560593 1049 ntBASIC17■□□□□ 0.31
EYA3Q99504 AC092115.1-201ENST00000566277 1402 ntBASIC17■□□□□ 0.31
EYA3Q99504 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
EYA3Q99504 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC17■□□□□ 0.31
EYA3Q99504 RARS-210ENST00000626454 177 ntTSL 5 BASIC17■□□□□ 0.31
EYA3Q99504 ESR1-214ENST00000638569 132 ntTSL 5 BASIC17■□□□□ 0.31
EYA3Q99504 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
EYA3Q99504 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
EYA3Q99504 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC17■□□□□ 0.31
EYA3Q99504 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
EYA3Q99504 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
EYA3Q99504 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
EYA3Q99504 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
EYA3Q99504 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
EYA3Q99504 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
EYA3Q99504 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
EYA3Q99504 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC16.99■□□□□ 0.31
EYA3Q99504 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
EYA3Q99504 PES1P2-201ENST00000449745 1735 ntBASIC16.99■□□□□ 0.31
EYA3Q99504 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
EYA3Q99504 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
EYA3Q99504 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
EYA3Q99504 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms