Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC12.52□□□□□ -0.41
AP3S1Q92572 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.52□□□□□ -0.41
AP3S1Q92572 GNAQP1-201ENST00000444815 1067 ntBASIC12.52□□□□□ -0.41
AP3S1Q92572 KRT18P56-201ENST00000507275 550 ntBASIC12.52□□□□□ -0.41
AP3S1Q92572 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.52□□□□□ -0.41
AP3S1Q92572 ZNF890P-202ENST00000530367 1156 ntBASIC12.52□□□□□ -0.41
AP3S1Q92572 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC12.52□□□□□ -0.41
AP3S1Q92572 AC044860.1-202ENST00000559481 777 ntBASIC12.52□□□□□ -0.41
AP3S1Q92572 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.52□□□□□ -0.41
AP3S1Q92572 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.52□□□□□ -0.41
AP3S1Q92572 AP001059.3-201ENST00000619053 235 ntBASIC12.52□□□□□ -0.41
AP3S1Q92572 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.52□□□□□ -0.41
AP3S1Q92572 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
AP3S1Q92572 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S1Q92572 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S1Q92572 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S1Q92572 NBN-203ENST00000409330 4523 ntTSL 5 BASIC12.52□□□□□ -0.41
AP3S1Q92572 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC12.52□□□□□ -0.41
AP3S1Q92572 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S1Q92572 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
AP3S1Q92572 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
AP3S1Q92572 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC12.52□□□□□ -0.41
AP3S1Q92572 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S1Q92572 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S1Q92572 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S1Q92572 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S1Q92572 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.52□□□□□ -0.41
AP3S1Q92572 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
AP3S1Q92572 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S1Q92572 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S1Q92572 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S1Q92572 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S1Q92572 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S1Q92572 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
AP3S1Q92572 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S1Q92572 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC12.52□□□□□ -0.41
AP3S1Q92572 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
AP3S1Q92572 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S1Q92572 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC12.51□□□□□ -0.41
AP3S1Q92572 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC12.51□□□□□ -0.41
AP3S1Q92572 PCDHB17P-202ENST00000623466 3066 ntBASIC12.51□□□□□ -0.41
AP3S1Q92572 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
AP3S1Q92572 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S1Q92572 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC12.51□□□□□ -0.41
AP3S1Q92572 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC12.51□□□□□ -0.41
AP3S1Q92572 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S1Q92572 ELL2P1-201ENST00000413990 1906 ntBASIC12.51□□□□□ -0.41
AP3S1Q92572 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC12.51□□□□□ -0.41
AP3S1Q92572 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S1Q92572 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S1Q92572 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S1Q92572 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S1Q92572 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S1Q92572 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S1Q92572 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
AP3S1Q92572 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
AP3S1Q92572 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
AP3S1Q92572 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.51□□□□□ -0.41
AP3S1Q92572 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
AP3S1Q92572 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.51□□□□□ -0.41
AP3S1Q92572 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
AP3S1Q92572 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.51□□□□□ -0.41
AP3S1Q92572 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.51□□□□□ -0.41
AP3S1Q92572 PUS1-205ENST00000535067 838 ntTSL 3 BASIC12.51□□□□□ -0.41
AP3S1Q92572 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.51□□□□□ -0.41
AP3S1Q92572 AC093520.2-201ENST00000561830 333 ntBASIC12.51□□□□□ -0.41
AP3S1Q92572 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC12.51□□□□□ -0.41
AP3S1Q92572 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.51□□□□□ -0.41
AP3S1Q92572 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.51□□□□□ -0.41
AP3S1Q92572 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.51□□□□□ -0.41
AP3S1Q92572 AC009093.7-201ENST00000623853 1223 ntBASIC12.51□□□□□ -0.41
AP3S1Q92572 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.51□□□□□ -0.41
AP3S1Q92572 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
AP3S1Q92572 AC124319.4-201ENST00000622931 2161 ntBASIC12.51□□□□□ -0.41
AP3S1Q92572 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S1Q92572 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S1Q92572 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC12.51□□□□□ -0.41
AP3S1Q92572 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
AP3S1Q92572 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S1Q92572 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
AP3S1Q92572 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC12.51□□□□□ -0.41
AP3S1Q92572 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S1Q92572 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.51□□□□□ -0.41
AP3S1Q92572 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S1Q92572 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC12.51□□□□□ -0.41
AP3S1Q92572 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S1Q92572 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S1Q92572 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
AP3S1Q92572 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S1Q92572 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S1Q92572 DDX12P-201ENST00000432996 2947 ntBASIC12.51□□□□□ -0.41
AP3S1Q92572 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S1Q92572 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12.51□□□□□ -0.41
AP3S1Q92572 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
AP3S1Q92572 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S1Q92572 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S1Q92572 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
AP3S1Q92572 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S1Q92572 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S1Q92572 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms