Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 USO1-201ENST00000264904 4135 ntTSL 2 BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 BNIP3P42-201ENST00000454982 569 ntBASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 BNIP3P29-201ENST00000598302 571 ntBASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 AL008721.1-201ENST00000609964 604 ntBASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 ZACNP1-201ENST00000612259 710 ntBASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 AL136301.1-201ENST00000615830 422 ntBASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 AC011447.5-201ENST00000616168 564 ntBASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC14.49□□□□□ -0.09
CFAP61Q8NHU2 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 AL136309.1-201ENST00000403917 691 ntBASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 FAM21FP-201ENST00000426241 1131 ntBASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 C2orf69P2-201ENST00000562032 1123 ntBASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 AC010328.2-201ENST00000597698 1111 ntBASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 MKRN5P-201ENST00000445263 1467 ntBASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 CSPG4P11-201ENST00000560634 4910 ntBASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CFAP61Q8NHU2 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms