Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
BEST2Q8NFU1 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.2■□□□□ 0.02
BEST2Q8NFU1 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BEST2Q8NFU1 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BEST2Q8NFU1 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC15.2■□□□□ 0.02
BEST2Q8NFU1 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
BEST2Q8NFU1 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BEST2Q8NFU1 IGF1-203ENST00000392904 761 ntTSL 5 BASIC15.2■□□□□ 0.02
BEST2Q8NFU1 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC15.2■□□□□ 0.02
BEST2Q8NFU1 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC15.2■□□□□ 0.02
BEST2Q8NFU1 RPSAP31-201ENST00000416648 895 ntBASIC15.2■□□□□ 0.02
BEST2Q8NFU1 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC15.2■□□□□ 0.02
BEST2Q8NFU1 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
BEST2Q8NFU1 AC018638.5-201ENST00000450885 754 ntBASIC15.2■□□□□ 0.02
BEST2Q8NFU1 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC15.2■□□□□ 0.02
BEST2Q8NFU1 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC15.2■□□□□ 0.02
BEST2Q8NFU1 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
BEST2Q8NFU1 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
BEST2Q8NFU1 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC15.2■□□□□ 0.02
BEST2Q8NFU1 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC15.2■□□□□ 0.02
BEST2Q8NFU1 KLF17P1-201ENST00000547105 1126 ntBASIC15.2■□□□□ 0.02
BEST2Q8NFU1 MT3-203ENST00000565838 421 ntTSL 3 BASIC15.2■□□□□ 0.02
BEST2Q8NFU1 AC011491.1-203ENST00000637688 543 ntBASIC15.2■□□□□ 0.02
BEST2Q8NFU1 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BEST2Q8NFU1 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BEST2Q8NFU1 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC15.2■□□□□ 0.02
BEST2Q8NFU1 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC15.2■□□□□ 0.02
BEST2Q8NFU1 KRT8P43-201ENST00000406052 1458 ntBASIC15.2■□□□□ 0.02
BEST2Q8NFU1 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
BEST2Q8NFU1 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 EML1-203ENST00000334192 4064 ntTSL 5 BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 KRT8P18-201ENST00000413425 1445 ntBASIC15.19■□□□□ 0.02
BEST2Q8NFU1 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 HLA-DMA-203ENST00000395305 777 ntBASIC15.19■□□□□ 0.02
BEST2Q8NFU1 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 SCARNA12-201ENST00000459155 270 ntBASIC15.19■□□□□ 0.02
BEST2Q8NFU1 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 AC104784.1-201ENST00000473096 294 ntBASIC15.19■□□□□ 0.02
BEST2Q8NFU1 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 MIR6842-201ENST00000612539 65 ntBASIC15.19■□□□□ 0.02
BEST2Q8NFU1 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 AP001184.1-201ENST00000637936 376 ntBASIC15.19■□□□□ 0.02
BEST2Q8NFU1 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 LINC01230-201ENST00000625222 3017 ntBASIC15.19■□□□□ 0.02
BEST2Q8NFU1 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
BEST2Q8NFU1 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 PYY2-201ENST00000315776 282 ntBASIC15.18■□□□□ 0.02
BEST2Q8NFU1 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
BEST2Q8NFU1 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms