Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 SALL4P6-201ENST00000429385 1691 ntBASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 PPT1-213ENST00000641319 2388 ntBASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 LINC01815-202ENST00000641468 1409 ntBASIC14.58□□□□□ -0.08
CDKL3Q8IVW4 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 AC068760.1-201ENST00000493579 1953 ntBASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 JPT2-214ENST00000569765 782 ntTSL 2 BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDKL3Q8IVW4 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 AL359845.1-201ENST00000458202 1648 ntBASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 AC104982.3-201ENST00000581995 514 ntBASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 AC005695.3-201ENST00000614522 232 ntBASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms