Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 SDCBP2P1-201ENST00000416115 614 ntBASIC13.47□□□□□ -0.25
RIF1Q5UIP0 CD37-203ENST00000426897 1204 ntTSL 2 BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 RPL13AP5-201ENST00000439189 612 ntBASIC13.47□□□□□ -0.25
RIF1Q5UIP0 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 AC005011.1-201ENST00000455206 210 ntBASIC13.47□□□□□ -0.25
RIF1Q5UIP0 YBX1P3-201ENST00000468366 909 ntBASIC13.47□□□□□ -0.25
RIF1Q5UIP0 SPATA24-204ENST00000507779 606 ntTSL 5 BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 AC022447.2-201ENST00000509750 543 ntTSL 3 BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 RN7SL832P-201ENST00000607781 1756 ntBASIC13.47□□□□□ -0.25
RIF1Q5UIP0 AMT-256ENST00000638063 1783 ntTSL 5 BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RIF1Q5UIP0 C18orf15-201ENST00000623680 2534 ntBASIC13.46□□□□□ -0.25
RIF1Q5UIP0 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RIF1Q5UIP0 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC13.46□□□□□ -0.25
RIF1Q5UIP0 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RIF1Q5UIP0 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RIF1Q5UIP0 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.46□□□□□ -0.25
RIF1Q5UIP0 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
RIF1Q5UIP0 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RIF1Q5UIP0 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RIF1Q5UIP0 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.46□□□□□ -0.25
RIF1Q5UIP0 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
RIF1Q5UIP0 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.46□□□□□ -0.25
RIF1Q5UIP0 CTNNBL1-203ENST00000373473 1493 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RIF1Q5UIP0 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RIF1Q5UIP0 AL356583.1-201ENST00000398739 1371 ntBASIC13.46□□□□□ -0.25
RIF1Q5UIP0 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC13.46□□□□□ -0.25
RIF1Q5UIP0 RN7SL477P-201ENST00000488440 286 ntBASIC13.46□□□□□ -0.25
RIF1Q5UIP0 AP001979.1-201ENST00000529222 751 ntBASIC13.46□□□□□ -0.25
RIF1Q5UIP0 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
RIF1Q5UIP0 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC13.46□□□□□ -0.25
RIF1Q5UIP0 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
RIF1Q5UIP0 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
RIF1Q5UIP0 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RIF1Q5UIP0 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
RIF1Q5UIP0 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
RIF1Q5UIP0 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
RIF1Q5UIP0 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
RIF1Q5UIP0 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RIF1Q5UIP0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RIF1Q5UIP0 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
RIF1Q5UIP0 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
RIF1Q5UIP0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
RIF1Q5UIP0 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC13.46□□□□□ -0.26
RIF1Q5UIP0 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
RIF1Q5UIP0 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RIF1Q5UIP0 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RIF1Q5UIP0 TPM3P7-201ENST00000338274 732 ntBASIC13.46□□□□□ -0.26
RIF1Q5UIP0 IGHV1OR15-9-201ENST00000338912 353 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
RIF1Q5UIP0 APOO-201ENST00000379226 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RIF1Q5UIP0 METTL5-203ENST00000392640 800 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
RIF1Q5UIP0 AC007690.1-201ENST00000451924 468 ntBASIC13.46□□□□□ -0.26
RIF1Q5UIP0 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC13.46□□□□□ -0.26
RIF1Q5UIP0 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC13.46□□□□□ -0.26
RIF1Q5UIP0 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
RIF1Q5UIP0 WASH5P-206ENST00000632506 1147 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
RIF1Q5UIP0 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.46□□□□□ -0.26
RIF1Q5UIP0 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.46□□□□□ -0.26
RIF1Q5UIP0 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
RIF1Q5UIP0 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
RIF1Q5UIP0 DUT-208ENST00000559540 1441 ntTSL 2 BASIC13.45□□□□□ -0.26
RIF1Q5UIP0 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RIF1Q5UIP0 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
RIF1Q5UIP0 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
RIF1Q5UIP0 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.45□□□□□ -0.26
RIF1Q5UIP0 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RIF1Q5UIP0 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.45□□□□□ -0.26
RIF1Q5UIP0 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.45□□□□□ -0.26
RIF1Q5UIP0 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
RIF1Q5UIP0 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.45□□□□□ -0.26
RIF1Q5UIP0 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RIF1Q5UIP0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RIF1Q5UIP0 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RIF1Q5UIP0 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
RIF1Q5UIP0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
RIF1Q5UIP0 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
RIF1Q5UIP0 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RIF1Q5UIP0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RIF1Q5UIP0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC13.45□□□□□ -0.26
RIF1Q5UIP0 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RIF1Q5UIP0 IGLV2-33-201ENST00000390302 412 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
RIF1Q5UIP0 APRT-202ENST00000426324 664 ntTSL 2 BASIC13.45□□□□□ -0.26
RIF1Q5UIP0 LINC02344-201ENST00000443576 644 ntTSL 2 BASIC13.45□□□□□ -0.26
RIF1Q5UIP0 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC13.45□□□□□ -0.26
RIF1Q5UIP0 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC13.45□□□□□ -0.26
RIF1Q5UIP0 KRTAP2-2-202ENST00000542910 390 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
RIF1Q5UIP0 AL133551.1-201ENST00000610279 1222 ntBASIC13.45□□□□□ -0.26
RIF1Q5UIP0 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms