Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC16.45■□□□□ 0.22
CERKLQ49MI3 GCSHP3-201ENST00000431120 391 ntBASIC16.45■□□□□ 0.22
CERKLQ49MI3 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC16.45■□□□□ 0.22
CERKLQ49MI3 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CERKLQ49MI3 RN7SL396P-201ENST00000471086 295 ntBASIC16.45■□□□□ 0.22
CERKLQ49MI3 AC025186.1-201ENST00000478174 870 ntBASIC16.45■□□□□ 0.22
CERKLQ49MI3 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC16.45■□□□□ 0.22
CERKLQ49MI3 OR2A1-AS1-210ENST00000496968 531 ntBASIC16.45■□□□□ 0.22
CERKLQ49MI3 REEP5-205ENST00000504247 480 ntTSL 5 BASIC16.45■□□□□ 0.22
CERKLQ49MI3 AC093909.3-201ENST00000504783 336 ntBASIC16.45■□□□□ 0.22
CERKLQ49MI3 AC026410.1-201ENST00000507366 1101 ntBASIC16.45■□□□□ 0.22
CERKLQ49MI3 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC16.45■□□□□ 0.22
CERKLQ49MI3 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC16.45■□□□□ 0.22
CERKLQ49MI3 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CERKLQ49MI3 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.45■□□□□ 0.22
CERKLQ49MI3 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC16.45■□□□□ 0.22
CERKLQ49MI3 AC012073.1-201ENST00000606114 1108 ntBASIC16.45■□□□□ 0.22
CERKLQ49MI3 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC16.45■□□□□ 0.22
CERKLQ49MI3 FUCA1P1-201ENST00000374476 1351 ntBASIC16.45■□□□□ 0.22
CERKLQ49MI3 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CERKLQ49MI3 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CERKLQ49MI3 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CERKLQ49MI3 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CERKLQ49MI3 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CERKLQ49MI3 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CERKLQ49MI3 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CERKLQ49MI3 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CERKLQ49MI3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CERKLQ49MI3 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CERKLQ49MI3 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CERKLQ49MI3 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC16.45■□□□□ 0.22
CERKLQ49MI3 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC16.45■□□□□ 0.22
CERKLQ49MI3 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC16.45■□□□□ 0.22
CERKLQ49MI3 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC16.45■□□□□ 0.22
CERKLQ49MI3 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CERKLQ49MI3 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC16.45■□□□□ 0.22
CERKLQ49MI3 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CERKLQ49MI3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CERKLQ49MI3 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.44■□□□□ 0.22
CERKLQ49MI3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CERKLQ49MI3 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CERKLQ49MI3 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC16.44■□□□□ 0.22
CERKLQ49MI3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CERKLQ49MI3 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CERKLQ49MI3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CERKLQ49MI3 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
CERKLQ49MI3 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CERKLQ49MI3 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC16.44■□□□□ 0.22
CERKLQ49MI3 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CERKLQ49MI3 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CERKLQ49MI3 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
CERKLQ49MI3 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CERKLQ49MI3 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
CERKLQ49MI3 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CERKLQ49MI3 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CERKLQ49MI3 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC16.44■□□□□ 0.22
CERKLQ49MI3 KRT18P62-201ENST00000446618 1287 ntBASIC16.44■□□□□ 0.22
CERKLQ49MI3 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC16.44■□□□□ 0.22
CERKLQ49MI3 AC093300.1-201ENST00000510368 1201 ntBASIC16.44■□□□□ 0.22
CERKLQ49MI3 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CERKLQ49MI3 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CERKLQ49MI3 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC16.44■□□□□ 0.22
CERKLQ49MI3 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC16.44■□□□□ 0.22
CERKLQ49MI3 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC16.44■□□□□ 0.22
CERKLQ49MI3 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC16.44■□□□□ 0.22
CERKLQ49MI3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CERKLQ49MI3 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CERKLQ49MI3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CERKLQ49MI3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CERKLQ49MI3 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CERKLQ49MI3 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CERKLQ49MI3 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.44■□□□□ 0.22
CERKLQ49MI3 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CERKLQ49MI3 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CERKLQ49MI3 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CERKLQ49MI3 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CERKLQ49MI3 AC097376.2-205ENST00000610159 5334 ntBASIC16.43■□□□□ 0.22
CERKLQ49MI3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CERKLQ49MI3 OR2I1P-210ENST00000642037 4691 ntBASIC16.43■□□□□ 0.22
CERKLQ49MI3 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC16.43■□□□□ 0.22
CERKLQ49MI3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CERKLQ49MI3 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CERKLQ49MI3 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CERKLQ49MI3 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CERKLQ49MI3 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CERKLQ49MI3 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC16.43■□□□□ 0.22
CERKLQ49MI3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CERKLQ49MI3 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CERKLQ49MI3 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CERKLQ49MI3 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CERKLQ49MI3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CERKLQ49MI3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CERKLQ49MI3 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CERKLQ49MI3 AC005912.2-201ENST00000619492 2400 ntBASIC16.43■□□□□ 0.22
CERKLQ49MI3 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CERKLQ49MI3 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CERKLQ49MI3 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CERKLQ49MI3 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CERKLQ49MI3 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CERKLQ49MI3 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms