Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
RAE1P78406 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.4□□□□□ -0.26
RAE1P78406 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.4□□□□□ -0.26
RAE1P78406 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC13.4□□□□□ -0.26
RAE1P78406 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.4□□□□□ -0.26
RAE1P78406 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAE1P78406 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAE1P78406 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.4□□□□□ -0.26
RAE1P78406 AC019294.4-201ENST00000561777 2905 ntBASIC13.4□□□□□ -0.26
RAE1P78406 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13.4□□□□□ -0.26
RAE1P78406 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAE1P78406 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.4□□□□□ -0.26
RAE1P78406 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.4□□□□□ -0.26
RAE1P78406 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
RAE1P78406 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
RAE1P78406 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
RAE1P78406 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAE1P78406 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RAE1P78406 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RAE1P78406 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAE1P78406 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
RAE1P78406 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.39□□□□□ -0.27
RAE1P78406 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAE1P78406 AC027612.1-201ENST00000445234 2395 ntBASIC13.39□□□□□ -0.27
RAE1P78406 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.39□□□□□ -0.27
RAE1P78406 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAE1P78406 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
RAE1P78406 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAE1P78406 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
RAE1P78406 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAE1P78406 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAE1P78406 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAE1P78406 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAE1P78406 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAE1P78406 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAE1P78406 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAE1P78406 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
RAE1P78406 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAE1P78406 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.39□□□□□ -0.27
RAE1P78406 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.39□□□□□ -0.27
RAE1P78406 BRWD1P1-201ENST00000401091 371 ntBASIC13.39□□□□□ -0.27
RAE1P78406 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC13.39□□□□□ -0.27
RAE1P78406 AC136604.1-202ENST00000425471 771 ntBASIC13.39□□□□□ -0.27
RAE1P78406 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC13.39□□□□□ -0.27
RAE1P78406 AC004898.1-201ENST00000451057 766 ntBASIC13.39□□□□□ -0.27
RAE1P78406 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAE1P78406 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.39□□□□□ -0.27
RAE1P78406 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.39□□□□□ -0.27
RAE1P78406 AL118558.3-201ENST00000607414 1079 ntBASIC13.39□□□□□ -0.27
RAE1P78406 AL161773.1-201ENST00000624845 863 ntBASIC13.39□□□□□ -0.27
RAE1P78406 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
RAE1P78406 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAE1P78406 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAE1P78406 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAE1P78406 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAE1P78406 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
RAE1P78406 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAE1P78406 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAE1P78406 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAE1P78406 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAE1P78406 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.39□□□□□ -0.27
RAE1P78406 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.39□□□□□ -0.27
RAE1P78406 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
RAE1P78406 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAE1P78406 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAE1P78406 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAE1P78406 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RAE1P78406 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
RAE1P78406 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
RAE1P78406 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.39□□□□□ -0.27
RAE1P78406 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAE1P78406 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
RAE1P78406 MARK2P16-201ENST00000605714 1723 ntBASIC13.39□□□□□ -0.27
RAE1P78406 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAE1P78406 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC13.39□□□□□ -0.27
RAE1P78406 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RAE1P78406 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
RAE1P78406 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RAE1P78406 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 NUTM2HP-201ENST00000442076 2498 ntBASIC13.38□□□□□ -0.27
RAE1P78406 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
RAE1P78406 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC13.38□□□□□ -0.27
RAE1P78406 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
RAE1P78406 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.38□□□□□ -0.27
RAE1P78406 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.38□□□□□ -0.27
RAE1P78406 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAE1P78406 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms