Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 AC093462.1-201ENST00000621167 1683 ntBASIC13.34□□□□□ -0.27
TRA2BP62995 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.34□□□□□ -0.27
TRA2BP62995 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRA2BP62995 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.34□□□□□ -0.27
TRA2BP62995 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRA2BP62995 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TRA2BP62995 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
TRA2BP62995 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
TRA2BP62995 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRA2BP62995 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRA2BP62995 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRA2BP62995 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRA2BP62995 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.33□□□□□ -0.28
TRA2BP62995 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.33□□□□□ -0.28
TRA2BP62995 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC13.33□□□□□ -0.28
TRA2BP62995 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.33□□□□□ -0.28
TRA2BP62995 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRA2BP62995 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC13.33□□□□□ -0.28
TRA2BP62995 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.33□□□□□ -0.28
TRA2BP62995 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.33□□□□□ -0.28
TRA2BP62995 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TRA2BP62995 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
TRA2BP62995 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TRA2BP62995 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRA2BP62995 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRA2BP62995 MBP-201ENST00000354542 575 ntTSL 2 BASIC13.33□□□□□ -0.28
TRA2BP62995 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
TRA2BP62995 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRA2BP62995 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
TRA2BP62995 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRA2BP62995 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC13.33□□□□□ -0.28
TRA2BP62995 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.33□□□□□ -0.28
TRA2BP62995 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.33□□□□□ -0.28
TRA2BP62995 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
TRA2BP62995 SLC25A15P3-201ENST00000505530 290 ntBASIC13.33□□□□□ -0.28
TRA2BP62995 POU5F1P2-201ENST00000521750 823 ntBASIC13.33□□□□□ -0.28
TRA2BP62995 NDUFB10P1-201ENST00000567319 521 ntBASIC13.33□□□□□ -0.28
TRA2BP62995 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.33□□□□□ -0.28
TRA2BP62995 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRA2BP62995 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
TRA2BP62995 AC244452.3-201ENST00000636814 210 ntBASIC13.33□□□□□ -0.28
TRA2BP62995 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRA2BP62995 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TRA2BP62995 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRA2BP62995 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRA2BP62995 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
TRA2BP62995 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.28
TRA2BP62995 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.33□□□□□ -0.28
TRA2BP62995 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRA2BP62995 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.33□□□□□ -0.28
TRA2BP62995 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRA2BP62995 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRA2BP62995 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TRA2BP62995 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.33□□□□□ -0.28
TRA2BP62995 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRA2BP62995 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRA2BP62995 DMBT1P1-203ENST00000636837 4628 ntBASIC13.33□□□□□ -0.28
TRA2BP62995 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC13.33□□□□□ -0.28
TRA2BP62995 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 AL031595.1-201ENST00000623969 4709 ntBASIC13.32□□□□□ -0.28
TRA2BP62995 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.32□□□□□ -0.28
TRA2BP62995 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TRA2BP62995 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.32□□□□□ -0.28
TRA2BP62995 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC13.32□□□□□ -0.28
TRA2BP62995 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 AC138028.6-201ENST00000616106 1482 ntBASIC13.32□□□□□ -0.28
TRA2BP62995 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 KRT17P5-201ENST00000332088 839 ntBASIC13.32□□□□□ -0.28
TRA2BP62995 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC13.32□□□□□ -0.28
TRA2BP62995 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC13.32□□□□□ -0.28
TRA2BP62995 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TRA2BP62995 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC13.32□□□□□ -0.28
TRA2BP62995 CYP46A4P-201ENST00000414953 267 ntBASIC13.32□□□□□ -0.28
TRA2BP62995 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.32□□□□□ -0.28
TRA2BP62995 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.32□□□□□ -0.28
TRA2BP62995 CD164-210ENST00000512821 964 ntTSL 2 BASIC13.32□□□□□ -0.28
TRA2BP62995 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC13.32□□□□□ -0.28
TRA2BP62995 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC13.32□□□□□ -0.28
TRA2BP62995 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.32□□□□□ -0.28
TRA2BP62995 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRA2BP62995 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms