Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SNRPFP62306 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNRPFP62306 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNRPFP62306 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNRPFP62306 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.31■□□□□ 0.04
SNRPFP62306 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC15.31■□□□□ 0.04
SNRPFP62306 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNRPFP62306 SAT1-201ENST00000379251 801 ntTSL 2 BASIC15.31■□□□□ 0.04
SNRPFP62306 SAT1-202ENST00000379253 909 ntTSL 2 BASIC15.31■□□□□ 0.04
SNRPFP62306 SAT1-203ENST00000379254 868 ntTSL 3 BASIC15.31■□□□□ 0.04
SNRPFP62306 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNRPFP62306 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SNRPFP62306 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC15.31■□□□□ 0.04
SNRPFP62306 RN7SL788P-201ENST00000460504 316 ntBASIC15.31■□□□□ 0.04
SNRPFP62306 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
SNRPFP62306 CD81-209ENST00000492627 886 ntTSL 3 BASIC15.31■□□□□ 0.04
SNRPFP62306 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNRPFP62306 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.31■□□□□ 0.04
SNRPFP62306 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC15.31■□□□□ 0.04
SNRPFP62306 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.31■□□□□ 0.04
SNRPFP62306 MIR3677-201ENST00000578964 60 ntBASIC15.31■□□□□ 0.04
SNRPFP62306 AC091812.3-201ENST00000621362 345 ntBASIC15.31■□□□□ 0.04
SNRPFP62306 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.31■□□□□ 0.04
SNRPFP62306 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNRPFP62306 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNRPFP62306 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNRPFP62306 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC15.31■□□□□ 0.04
SNRPFP62306 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC15.31■□□□□ 0.04
SNRPFP62306 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNRPFP62306 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNRPFP62306 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNRPFP62306 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC15.31■□□□□ 0.04
SNRPFP62306 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNRPFP62306 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC15.31■□□□□ 0.04
SNRPFP62306 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNRPFP62306 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNRPFP62306 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC15.31■□□□□ 0.04
SNRPFP62306 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNRPFP62306 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.3■□□□□ 0.04
SNRPFP62306 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.3■□□□□ 0.04
SNRPFP62306 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNRPFP62306 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.3■□□□□ 0.04
SNRPFP62306 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNRPFP62306 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.3■□□□□ 0.04
SNRPFP62306 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNRPFP62306 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SNRPFP62306 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNRPFP62306 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNRPFP62306 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNRPFP62306 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SNRPFP62306 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNRPFP62306 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SNRPFP62306 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNRPFP62306 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNRPFP62306 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNRPFP62306 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC15.3■□□□□ 0.04
SNRPFP62306 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNRPFP62306 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNRPFP62306 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC15.3■□□□□ 0.04
SNRPFP62306 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNRPFP62306 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.3■□□□□ 0.04
SNRPFP62306 FTH1P22-201ENST00000456305 520 ntBASIC15.3■□□□□ 0.04
SNRPFP62306 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC15.3■□□□□ 0.04
SNRPFP62306 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.3■□□□□ 0.04
SNRPFP62306 KLF17P1-201ENST00000547105 1126 ntBASIC15.3■□□□□ 0.04
SNRPFP62306 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNRPFP62306 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNRPFP62306 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC15.3■□□□□ 0.04
SNRPFP62306 AC145285.5-201ENST00000562217 361 ntBASIC15.3■□□□□ 0.04
SNRPFP62306 AC138761.6-201ENST00000583997 1423 ntBASIC15.3■□□□□ 0.04
SNRPFP62306 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
SNRPFP62306 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNRPFP62306 AF254983.2-201ENST00000612331 135 ntBASIC15.3■□□□□ 0.04
SNRPFP62306 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC15.3■□□□□ 0.04
SNRPFP62306 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC15.3■□□□□ 0.04
SNRPFP62306 AC092053.3-201ENST00000641308 4975 ntBASIC15.3■□□□□ 0.04
SNRPFP62306 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.3■□□□□ 0.04
SNRPFP62306 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNRPFP62306 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNRPFP62306 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNRPFP62306 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.3■□□□□ 0.04
SNRPFP62306 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.29■□□□□ 0.04
SNRPFP62306 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPFP62306 AC089987.1-201ENST00000551654 2209 ntBASIC15.29■□□□□ 0.04
SNRPFP62306 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPFP62306 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPFP62306 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPFP62306 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
SNRPFP62306 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SNRPFP62306 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
SNRPFP62306 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPFP62306 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
SNRPFP62306 TBC1D3J-201ENST00000620719 1426 ntBASIC15.29■□□□□ 0.04
SNRPFP62306 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPFP62306 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPFP62306 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC15.29■□□□□ 0.04
SNRPFP62306 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPFP62306 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPFP62306 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPFP62306 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms