Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
AP3S2P59780 PLEKHG3-201ENST00000247226 10351 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
AP3S2P59780 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
AP3S2P59780 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC12.21□□□□□ -0.45
AP3S2P59780 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
AP3S2P59780 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.21□□□□□ -0.45
AP3S2P59780 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC12.21□□□□□ -0.45
AP3S2P59780 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
AP3S2P59780 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.21□□□□□ -0.45
AP3S2P59780 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
AP3S2P59780 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
AP3S2P59780 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC12.21□□□□□ -0.45
AP3S2P59780 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
AP3S2P59780 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
AP3S2P59780 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
AP3S2P59780 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
AP3S2P59780 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.21□□□□□ -0.45
AP3S2P59780 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.21□□□□□ -0.45
AP3S2P59780 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
AP3S2P59780 KLF2P2-201ENST00000416807 1039 ntBASIC12.21□□□□□ -0.45
AP3S2P59780 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.21□□□□□ -0.45
AP3S2P59780 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.21□□□□□ -0.45
AP3S2P59780 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.21□□□□□ -0.45
AP3S2P59780 ZNF890P-202ENST00000530367 1156 ntBASIC12.21□□□□□ -0.45
AP3S2P59780 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.21□□□□□ -0.45
AP3S2P59780 AL391069.4-201ENST00000609583 481 ntBASIC12.21□□□□□ -0.45
AP3S2P59780 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.21□□□□□ -0.45
AP3S2P59780 AP001059.3-201ENST00000619053 235 ntBASIC12.21□□□□□ -0.45
AP3S2P59780 AC009093.7-201ENST00000623853 1223 ntBASIC12.21□□□□□ -0.45
AP3S2P59780 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.21□□□□□ -0.45
AP3S2P59780 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
AP3S2P59780 NMNAT2-201ENST00000287713 5663 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
AP3S2P59780 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
AP3S2P59780 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
AP3S2P59780 ELL2P1-201ENST00000413990 1906 ntBASIC12.21□□□□□ -0.46
AP3S2P59780 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
AP3S2P59780 AC012531.1-201ENST00000562848 2680 ntBASIC12.21□□□□□ -0.46
AP3S2P59780 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC12.21□□□□□ -0.46
AP3S2P59780 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
AP3S2P59780 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC12.21□□□□□ -0.46
AP3S2P59780 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
AP3S2P59780 MAST4-202ENST00000403625 10711 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
AP3S2P59780 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
AP3S2P59780 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
AP3S2P59780 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.21□□□□□ -0.46
AP3S2P59780 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.21□□□□□ -0.46
AP3S2P59780 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
AP3S2P59780 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S2P59780 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC12.2□□□□□ -0.46
AP3S2P59780 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S2P59780 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S2P59780 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC12.2□□□□□ -0.46
AP3S2P59780 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S2P59780 KRT8P28-201ENST00000433288 1390 ntBASIC12.2□□□□□ -0.46
AP3S2P59780 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S2P59780 TBL1X-206ENST00000424279 5451 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
AP3S2P59780 DPYSL5-207ENST00000614712 5128 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
AP3S2P59780 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S2P59780 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
AP3S2P59780 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S2P59780 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
AP3S2P59780 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC12.2□□□□□ -0.46
AP3S2P59780 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S2P59780 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
AP3S2P59780 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S2P59780 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
AP3S2P59780 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S2P59780 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S2P59780 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S2P59780 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
AP3S2P59780 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
AP3S2P59780 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
AP3S2P59780 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.2□□□□□ -0.46
AP3S2P59780 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.2□□□□□ -0.46
AP3S2P59780 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.2□□□□□ -0.46
AP3S2P59780 CEND1P1-201ENST00000451006 455 ntBASIC12.2□□□□□ -0.46
AP3S2P59780 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S2P59780 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.2□□□□□ -0.46
AP3S2P59780 PUS1-205ENST00000535067 838 ntTSL 3 BASIC12.2□□□□□ -0.46
AP3S2P59780 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.2□□□□□ -0.46
AP3S2P59780 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.2□□□□□ -0.46
AP3S2P59780 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC12.2□□□□□ -0.46
AP3S2P59780 AC044860.1-202ENST00000559481 777 ntBASIC12.2□□□□□ -0.46
AP3S2P59780 ARL16-209ENST00000573715 763 ntTSL 3 BASIC12.2□□□□□ -0.46
AP3S2P59780 ARL16-211ENST00000576135 694 ntTSL 3 BASIC12.2□□□□□ -0.46
AP3S2P59780 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.2□□□□□ -0.46
AP3S2P59780 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.2□□□□□ -0.46
AP3S2P59780 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC12.2□□□□□ -0.46
AP3S2P59780 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S2P59780 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC12.2□□□□□ -0.46
AP3S2P59780 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S2P59780 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
AP3S2P59780 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC12.2□□□□□ -0.46
AP3S2P59780 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S2P59780 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
AP3S2P59780 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC12.2□□□□□ -0.46
AP3S2P59780 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
AP3S2P59780 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S2P59780 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC12.2□□□□□ -0.46
AP3S2P59780 BX324167.2-201ENST00000623717 3316 ntBASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms