Protein–RNA interactions for Protein: P55735

SEC13, Protein SEC13 homolog, humanhuman

Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13P55735 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC14.26□□□□□ -0.13
SEC13P55735 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC13P55735 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.26□□□□□ -0.13
SEC13P55735 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SEC13P55735 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC13P55735 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SEC13P55735 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC13P55735 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC13P55735 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC13P55735 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC13P55735 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC13P55735 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.26□□□□□ -0.13
SEC13P55735 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC14.25□□□□□ -0.13
SEC13P55735 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC13P55735 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.25□□□□□ -0.13
SEC13P55735 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC13P55735 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.25□□□□□ -0.13
SEC13P55735 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC13P55735 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.25□□□□□ -0.13
SEC13P55735 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC14.25□□□□□ -0.13
SEC13P55735 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SEC13P55735 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.25□□□□□ -0.13
SEC13P55735 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.25□□□□□ -0.13
SEC13P55735 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC13P55735 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SEC13P55735 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.25□□□□□ -0.13
SEC13P55735 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SEC13P55735 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SEC13P55735 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SEC13P55735 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SEC13P55735 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SEC13P55735 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC13P55735 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.25□□□□□ -0.13
SEC13P55735 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC13P55735 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC13P55735 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SEC13P55735 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC13P55735 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SEC13P55735 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC14.25□□□□□ -0.13
SEC13P55735 HMGA1P1-201ENST00000415560 1062 ntBASIC14.25□□□□□ -0.13
SEC13P55735 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.25□□□□□ -0.13
SEC13P55735 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC13P55735 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC14.25□□□□□ -0.13
SEC13P55735 OR2A1-AS1-210ENST00000496968 531 ntBASIC14.25□□□□□ -0.13
SEC13P55735 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC14.25□□□□□ -0.13
SEC13P55735 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC14.25□□□□□ -0.13
SEC13P55735 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC14.25□□□□□ -0.13
SEC13P55735 BATF-202ENST00000555504 361 ntTSL 2 BASIC14.25□□□□□ -0.13
SEC13P55735 USB1-205ENST00000561743 1135 ntTSL 3 BASIC14.25□□□□□ -0.13
SEC13P55735 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC14.25□□□□□ -0.13
SEC13P55735 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.25□□□□□ -0.13
SEC13P55735 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SEC13P55735 AC132825.4-202ENST00000578792 434 ntBASIC14.25□□□□□ -0.13
SEC13P55735 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC14.25□□□□□ -0.13
SEC13P55735 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC14.25□□□□□ -0.13
SEC13P55735 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC14.25□□□□□ -0.13
SEC13P55735 AC060766.1-201ENST00000590824 627 ntBASIC14.25□□□□□ -0.13
SEC13P55735 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SEC13P55735 MIR6746-201ENST00000620971 63 ntBASIC14.25□□□□□ -0.13
SEC13P55735 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SEC13P55735 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SEC13P55735 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SEC13P55735 HSPA8P5-201ENST00000456928 2069 ntBASIC14.25□□□□□ -0.13
SEC13P55735 AP001267.2-201ENST00000532619 2086 ntBASIC14.25□□□□□ -0.13
SEC13P55735 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC13P55735 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.25□□□□□ -0.13
SEC13P55735 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.25□□□□□ -0.13
SEC13P55735 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SEC13P55735 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SEC13P55735 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC13P55735 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.25□□□□□ -0.13
SEC13P55735 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC13P55735 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
SEC13P55735 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.25□□□□□ -0.13
SEC13P55735 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC13P55735 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC13P55735 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.25□□□□□ -0.13
SEC13P55735 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SEC13P55735 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SEC13P55735 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SEC13P55735 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.24□□□□□ -0.13
SEC13P55735 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC13P55735 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC13P55735 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.24□□□□□ -0.13
SEC13P55735 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.24□□□□□ -0.13
SEC13P55735 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.24□□□□□ -0.13
SEC13P55735 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SEC13P55735 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC14.24□□□□□ -0.13
SEC13P55735 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC13P55735 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SEC13P55735 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC13P55735 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC13P55735 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SEC13P55735 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC13P55735 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC14.24□□□□□ -0.13
SEC13P55735 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC13P55735 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC13P55735 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC13P55735 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SEC13P55735 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms