Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC17.06■□□□□ 0.32
NUP98P52948 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NUP98P52948 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NUP98P52948 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NUP98P52948 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUP98P52948 AL137244.1-201ENST00000422931 865 ntBASIC17.06■□□□□ 0.32
NUP98P52948 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
NUP98P52948 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC17.06■□□□□ 0.32
NUP98P52948 MTHFD2P7-201ENST00000483867 983 ntBASIC17.06■□□□□ 0.32
NUP98P52948 RPL29P2-201ENST00000488409 460 ntBASIC17.06■□□□□ 0.32
NUP98P52948 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC17.06■□□□□ 0.32
NUP98P52948 PIGCP1-201ENST00000527583 895 ntBASIC17.06■□□□□ 0.32
NUP98P52948 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NUP98P52948 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC17.06■□□□□ 0.32
NUP98P52948 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC17.06■□□□□ 0.32
NUP98P52948 AC016582.2-202ENST00000587765 1094 ntBASIC17.06■□□□□ 0.32
NUP98P52948 AC004686.1-201ENST00000605113 538 ntBASIC17.06■□□□□ 0.32
NUP98P52948 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC17.06■□□□□ 0.32
NUP98P52948 SNORA50D-202ENST00000627561 132 ntBASIC17.06■□□□□ 0.32
NUP98P52948 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC17.06■□□□□ 0.32
NUP98P52948 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NUP98P52948 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUP98P52948 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUP98P52948 AC111170.3-201ENST00000624282 2464 ntBASIC17.06■□□□□ 0.32
NUP98P52948 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NUP98P52948 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NUP98P52948 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUP98P52948 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
NUP98P52948 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUP98P52948 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NUP98P52948 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUP98P52948 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUP98P52948 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
NUP98P52948 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC17.06■□□□□ 0.32
NUP98P52948 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUP98P52948 AC007686.3-201ENST00000619017 3487 ntBASIC17.05■□□□□ 0.32
NUP98P52948 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NUP98P52948 AIG1-203ENST00000367596 559 ntTSL 2 BASIC17.05■□□□□ 0.32
NUP98P52948 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NUP98P52948 RN7SL578P-201ENST00000477781 283 ntBASIC17.05■□□□□ 0.32
NUP98P52948 RN7SL523P-201ENST00000484401 298 ntBASIC17.05■□□□□ 0.32
NUP98P52948 AC023906.1-201ENST00000486386 453 ntBASIC17.05■□□□□ 0.32
NUP98P52948 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC17.05■□□□□ 0.32
NUP98P52948 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC17.05■□□□□ 0.32
NUP98P52948 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC17.05■□□□□ 0.32
NUP98P52948 Z82244.1-201ENST00000631502 840 ntBASIC17.05■□□□□ 0.32
NUP98P52948 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP98P52948 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC17.05■□□□□ 0.32
NUP98P52948 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC17.05■□□□□ 0.32
NUP98P52948 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP98P52948 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC17.05■□□□□ 0.32
NUP98P52948 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NUP98P52948 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP98P52948 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP98P52948 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP98P52948 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP98P52948 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
NUP98P52948 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP98P52948 HDGF-202ENST00000368206 960 ntTSL 5 BASIC17.05■□□□□ 0.32
NUP98P52948 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
NUP98P52948 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP98P52948 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
NUP98P52948 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC17.05■□□□□ 0.32
NUP98P52948 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC17.05■□□□□ 0.32
NUP98P52948 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC17.05■□□□□ 0.32
NUP98P52948 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC17.05■□□□□ 0.32
NUP98P52948 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC17.05■□□□□ 0.32
NUP98P52948 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC17.05■□□□□ 0.32
NUP98P52948 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC17.05■□□□□ 0.32
NUP98P52948 AL357143.1-203ENST00000639750 881 ntBASIC17.05■□□□□ 0.32
NUP98P52948 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP98P52948 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUP98P52948 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NUP98P52948 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NUP98P52948 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC17.04■□□□□ 0.32
NUP98P52948 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUP98P52948 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC17.04■□□□□ 0.32
NUP98P52948 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUP98P52948 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
NUP98P52948 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUP98P52948 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUP98P52948 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUP98P52948 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUP98P52948 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUP98P52948 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUP98P52948 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NUP98P52948 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUP98P52948 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC17.04■□□□□ 0.32
NUP98P52948 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUP98P52948 SERF2-204ENST00000402131 586 ntTSL 2 BASIC17.04■□□□□ 0.32
NUP98P52948 CROT-203ENST00000419147 2959 ntTSL 2 BASIC17.04■□□□□ 0.32
NUP98P52948 HNRNPA3P12-201ENST00000437410 1063 ntBASIC17.04■□□□□ 0.32
NUP98P52948 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC17.04■□□□□ 0.32
NUP98P52948 DPY19L2P4-201ENST00000479881 442 ntBASIC17.04■□□□□ 0.32
NUP98P52948 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC17.04■□□□□ 0.32
NUP98P52948 MIR2278-201ENST00000516344 96 ntBASIC17.04■□□□□ 0.32
NUP98P52948 ACY3-202ENST00000529256 933 ntTSL 3 BASIC17.04■□□□□ 0.32
NUP98P52948 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NUP98P52948 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC17.04■□□□□ 0.32
NUP98P52948 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms