Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LHX2P50458 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LHX2P50458 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
LHX2P50458 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.59□□□□□ -0.39
LHX2P50458 AC019109.1-201ENST00000401725 1874 ntBASIC12.59□□□□□ -0.39
LHX2P50458 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LHX2P50458 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LHX2P50458 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.59□□□□□ -0.39
LHX2P50458 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC12.59□□□□□ -0.39
LHX2P50458 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LHX2P50458 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
LHX2P50458 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
LHX2P50458 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC12.59□□□□□ -0.39
LHX2P50458 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LHX2P50458 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.59□□□□□ -0.39
LHX2P50458 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.59□□□□□ -0.39
LHX2P50458 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC12.59□□□□□ -0.39
LHX2P50458 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.59□□□□□ -0.39
LHX2P50458 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LHX2P50458 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.59□□□□□ -0.39
LHX2P50458 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LHX2P50458 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
LHX2P50458 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC12.59□□□□□ -0.39
LHX2P50458 RN7SKP109-201ENST00000410592 316 ntBASIC12.59□□□□□ -0.39
LHX2P50458 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC12.59□□□□□ -0.39
LHX2P50458 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LHX2P50458 RGS5-216ENST00000449680 788 ntTSL 3 BASIC12.59□□□□□ -0.39
LHX2P50458 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
LHX2P50458 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC12.59□□□□□ -0.39
LHX2P50458 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
LHX2P50458 KRT8P2-201ENST00000556193 944 ntBASIC12.59□□□□□ -0.39
LHX2P50458 AC007952.4-201ENST00000573866 637 ntBASIC12.59□□□□□ -0.39
LHX2P50458 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LHX2P50458 RN7SL470P-201ENST00000583069 259 ntBASIC12.59□□□□□ -0.39
LHX2P50458 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC12.59□□□□□ -0.39
LHX2P50458 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC12.59□□□□□ -0.39
LHX2P50458 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC12.59□□□□□ -0.39
LHX2P50458 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC12.59□□□□□ -0.39
LHX2P50458 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LHX2P50458 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LHX2P50458 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LHX2P50458 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LHX2P50458 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LHX2P50458 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LHX2P50458 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.59□□□□□ -0.39
LHX2P50458 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
LHX2P50458 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.59□□□□□ -0.39
LHX2P50458 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.59□□□□□ -0.39
LHX2P50458 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LHX2P50458 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LHX2P50458 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
LHX2P50458 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LHX2P50458 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
LHX2P50458 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LHX2P50458 AL137784.3-201ENST00000623858 2288 ntBASIC12.59□□□□□ -0.39
LHX2P50458 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LHX2P50458 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LHX2P50458 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LHX2P50458 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LHX2P50458 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
LHX2P50458 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
LHX2P50458 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LHX2P50458 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LHX2P50458 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
LHX2P50458 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LHX2P50458 ODCP-201ENST00000459650 1639 ntBASIC12.59□□□□□ -0.39
LHX2P50458 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.39
LHX2P50458 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
LHX2P50458 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC12.58□□□□□ -0.4
LHX2P50458 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LHX2P50458 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LHX2P50458 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
LHX2P50458 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LHX2P50458 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LHX2P50458 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LHX2P50458 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
LHX2P50458 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
LHX2P50458 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LHX2P50458 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
LHX2P50458 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
LHX2P50458 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LHX2P50458 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LHX2P50458 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.58□□□□□ -0.4
LHX2P50458 AC092573.1-201ENST00000433054 884 ntBASIC12.58□□□□□ -0.4
LHX2P50458 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LHX2P50458 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC12.58□□□□□ -0.4
LHX2P50458 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LHX2P50458 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC12.58□□□□□ -0.4
LHX2P50458 MIR5572-201ENST00000583188 137 ntBASIC12.58□□□□□ -0.4
LHX2P50458 GAS7-216ENST00000583882 553 ntTSL 5 BASIC12.58□□□□□ -0.4
LHX2P50458 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LHX2P50458 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC12.58□□□□□ -0.4
LHX2P50458 AC005041.3-201ENST00000606287 649 ntBASIC12.58□□□□□ -0.4
LHX2P50458 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
LHX2P50458 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LHX2P50458 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LHX2P50458 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.58□□□□□ -0.4
LHX2P50458 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
LHX2P50458 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LHX2P50458 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms