Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC15.23■□□□□ 0.03
HTTP42858 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTTP42858 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTTP42858 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.23■□□□□ 0.03
HTTP42858 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTTP42858 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.23■□□□□ 0.03
HTTP42858 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
HTTP42858 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTTP42858 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTTP42858 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.23■□□□□ 0.03
HTTP42858 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTTP42858 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC15.23■□□□□ 0.03
HTTP42858 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
HTTP42858 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTTP42858 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTTP42858 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTTP42858 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HTTP42858 AC096677.3-201ENST00000413162 387 ntBASIC15.23■□□□□ 0.03
HTTP42858 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC15.23■□□□□ 0.03
HTTP42858 AC104759.1-201ENST00000559109 939 ntBASIC15.23■□□□□ 0.03
HTTP42858 MIR378I-201ENST00000582688 76 ntBASIC15.23■□□□□ 0.03
HTTP42858 AL133551.1-201ENST00000610279 1222 ntBASIC15.23■□□□□ 0.03
HTTP42858 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTTP42858 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTTP42858 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HTTP42858 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HTTP42858 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HTTP42858 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTTP42858 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTTP42858 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HTTP42858 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTTP42858 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTTP42858 TRIQK-219ENST00000523580 1630 ntTSL 2 BASIC15.23■□□□□ 0.03
HTTP42858 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.23■□□□□ 0.03
HTTP42858 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTTP42858 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.23■□□□□ 0.03
HTTP42858 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTTP42858 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HTTP42858 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTTP42858 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTTP42858 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.23■□□□□ 0.03
HTTP42858 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC15.23■□□□□ 0.03
HTTP42858 SUGT1-202ENST00000343788 1217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTTP42858 TMEM256P1-201ENST00000430550 340 ntBASIC15.23■□□□□ 0.03
HTTP42858 HNRNPA1P9-201ENST00000450624 950 ntBASIC15.23■□□□□ 0.03
HTTP42858 AC103810.4-201ENST00000578601 257 ntBASIC15.23■□□□□ 0.03
HTTP42858 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC15.23■□□□□ 0.03
HTTP42858 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC15.23■□□□□ 0.03
HTTP42858 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.23■□□□□ 0.03
HTTP42858 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.23■□□□□ 0.03
HTTP42858 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTTP42858 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC15.23■□□□□ 0.03
HTTP42858 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTTP42858 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC15.22■□□□□ 0.03
HTTP42858 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTTP42858 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
HTTP42858 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.22■□□□□ 0.03
HTTP42858 ANXA13-201ENST00000262219 1588 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HTTP42858 BTN2A2-204ENST00000432533 1570 ntTSL 2 BASIC15.22■□□□□ 0.03
HTTP42858 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
HTTP42858 RBP1-201ENST00000232219 898 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HTTP42858 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC15.22■□□□□ 0.03
HTTP42858 C5orf38-203ENST00000457752 387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTTP42858 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC15.22■□□□□ 0.03
HTTP42858 AP001979.2-201ENST00000526254 975 ntTSL 5 BASIC15.22■□□□□ 0.03
HTTP42858 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC15.22■□□□□ 0.03
HTTP42858 RBP1-206ENST00000617459 667 ntTSL 2 BASIC15.22■□□□□ 0.03
HTTP42858 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTTP42858 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTTP42858 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC15.22■□□□□ 0.03
HTTP42858 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC15.22■□□□□ 0.03
HTTP42858 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTTP42858 METTL22-203ENST00000561758 1312 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
HTTP42858 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTTP42858 REG3A-201ENST00000305165 718 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HTTP42858 MIR1249-201ENST00000408671 66 ntBASIC15.22■□□□□ 0.03
HTTP42858 GAPDHP65-201ENST00000425487 1006 ntBASIC15.22■□□□□ 0.03
HTTP42858 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC15.22■□□□□ 0.03
HTTP42858 AC105424.1-201ENST00000514583 209 ntBASIC15.22■□□□□ 0.03
HTTP42858 AC116552.1-201ENST00000563243 733 ntTSL 3 BASIC15.22■□□□□ 0.03
HTTP42858 AL353708.1-201ENST00000567904 1257 ntBASIC15.22■□□□□ 0.03
HTTP42858 AC090505.1-201ENST00000430515 1834 ntBASIC15.22■□□□□ 0.03
HTTP42858 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
HTTP42858 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTTP42858 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTTP42858 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTTP42858 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
HTTP42858 AC034205.3-201ENST00000603595 1376 ntBASIC15.22■□□□□ 0.03
HTTP42858 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC15.22■□□□□ 0.03
HTTP42858 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HTTP42858 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTTP42858 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
HTTP42858 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HTTP42858 MARCKSL1P2-201ENST00000401037 976 ntBASIC15.21■□□□□ 0.03
HTTP42858 LINC01664-202ENST00000441544 1175 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HTTP42858 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC15.21■□□□□ 0.03
HTTP42858 PXN-AS1-205ENST00000542314 707 ntTSL 2 BASIC15.21■□□□□ 0.03
HTTP42858 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HTTP42858 DHRS12-202ENST00000280056 1324 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HTTP42858 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms