Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
FDFT1P37268 AL359845.1-201ENST00000458202 1648 ntBASIC14.48□□□□□ -0.09
FDFT1P37268 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
FDFT1P37268 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.48□□□□□ -0.09
FDFT1P37268 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FDFT1P37268 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.48□□□□□ -0.09
FDFT1P37268 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FDFT1P37268 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FDFT1P37268 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.48□□□□□ -0.09
FDFT1P37268 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
FDFT1P37268 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
FDFT1P37268 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FDFT1P37268 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.48□□□□□ -0.09
FDFT1P37268 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
FDFT1P37268 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FDFT1P37268 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FDFT1P37268 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FDFT1P37268 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
FDFT1P37268 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
FDFT1P37268 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
FDFT1P37268 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
FDFT1P37268 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
FDFT1P37268 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
FDFT1P37268 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
FDFT1P37268 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.48□□□□□ -0.09
FDFT1P37268 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
FDFT1P37268 BTBD6P1-201ENST00000412176 1267 ntBASIC14.48□□□□□ -0.09
FDFT1P37268 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.48□□□□□ -0.09
FDFT1P37268 AC119751.2-201ENST00000504529 210 ntBASIC14.48□□□□□ -0.09
FDFT1P37268 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.48□□□□□ -0.09
FDFT1P37268 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
FDFT1P37268 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.48□□□□□ -0.09
FDFT1P37268 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.48□□□□□ -0.09
FDFT1P37268 AL035252.4-201ENST00000624174 288 ntBASIC14.48□□□□□ -0.09
FDFT1P37268 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
FDFT1P37268 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FDFT1P37268 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.48□□□□□ -0.09
FDFT1P37268 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FDFT1P37268 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FDFT1P37268 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC14.48□□□□□ -0.09
FDFT1P37268 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FDFT1P37268 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.48□□□□□ -0.09
FDFT1P37268 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
FDFT1P37268 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.48□□□□□ -0.09
FDFT1P37268 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
FDFT1P37268 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
FDFT1P37268 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.48□□□□□ -0.09
FDFT1P37268 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
FDFT1P37268 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.48□□□□□ -0.09
FDFT1P37268 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FDFT1P37268 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.48□□□□□ -0.09
FDFT1P37268 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
FDFT1P37268 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FDFT1P37268 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FDFT1P37268 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FDFT1P37268 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.47□□□□□ -0.09
FDFT1P37268 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
FDFT1P37268 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
FDFT1P37268 AC068760.1-201ENST00000493579 1953 ntBASIC14.47□□□□□ -0.09
FDFT1P37268 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
FDFT1P37268 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
FDFT1P37268 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.47□□□□□ -0.09
FDFT1P37268 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC14.47□□□□□ -0.09
FDFT1P37268 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FDFT1P37268 AC004899.1-201ENST00000424687 1714 ntBASIC14.47□□□□□ -0.09
FDFT1P37268 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
FDFT1P37268 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
FDFT1P37268 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
FDFT1P37268 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FDFT1P37268 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
FDFT1P37268 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
FDFT1P37268 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC14.47□□□□□ -0.09
FDFT1P37268 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.47□□□□□ -0.09
FDFT1P37268 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
FDFT1P37268 SALL4P6-201ENST00000429385 1691 ntBASIC14.47□□□□□ -0.09
FDFT1P37268 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FDFT1P37268 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
FDFT1P37268 AC078875.1-201ENST00000431907 724 ntBASIC14.47□□□□□ -0.09
FDFT1P37268 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.47□□□□□ -0.09
FDFT1P37268 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.47□□□□□ -0.09
FDFT1P37268 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.47□□□□□ -0.09
FDFT1P37268 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.47□□□□□ -0.09
FDFT1P37268 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FDFT1P37268 HILS1-202ENST00000545329 423 ntBASIC14.47□□□□□ -0.09
FDFT1P37268 RN7SL560P-201ENST00000577943 264 ntBASIC14.47□□□□□ -0.09
FDFT1P37268 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.47□□□□□ -0.09
FDFT1P37268 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.47□□□□□ -0.09
FDFT1P37268 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
FDFT1P37268 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.47□□□□□ -0.09
FDFT1P37268 AC009542.2-202ENST00000619004 1067 ntBASIC14.47□□□□□ -0.09
FDFT1P37268 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.47□□□□□ -0.09
FDFT1P37268 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
FDFT1P37268 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
FDFT1P37268 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FDFT1P37268 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FDFT1P37268 LINC01815-202ENST00000641468 1409 ntBASIC14.47□□□□□ -0.09
FDFT1P37268 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.47□□□□□ -0.09
FDFT1P37268 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.47□□□□□ -0.09
FDFT1P37268 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.47□□□□□ -0.09
FDFT1P37268 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms