Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXD12P35452 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXD12P35452 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
HOXD12P35452 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HOXD12P35452 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXD12P35452 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC14.22□□□□□ -0.13
HOXD12P35452 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HOXD12P35452 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14.22□□□□□ -0.13
HOXD12P35452 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC14.22□□□□□ -0.13
HOXD12P35452 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HOXD12P35452 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC14.22□□□□□ -0.13
HOXD12P35452 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
HOXD12P35452 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXD12P35452 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC14.22□□□□□ -0.13
HOXD12P35452 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC14.22□□□□□ -0.13
HOXD12P35452 NEU3-207ENST00000534628 746 ntTSL 2 BASIC14.22□□□□□ -0.13
HOXD12P35452 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.22□□□□□ -0.13
HOXD12P35452 ETV2-207ENST00000619399 994 ntTSL 5 BASIC14.22□□□□□ -0.13
HOXD12P35452 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.22□□□□□ -0.13
HOXD12P35452 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
HOXD12P35452 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HOXD12P35452 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.22□□□□□ -0.13
HOXD12P35452 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HOXD12P35452 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXD12P35452 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXD12P35452 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.22□□□□□ -0.13
HOXD12P35452 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXD12P35452 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HOXD12P35452 AC007326.2-201ENST00000624224 7579 ntBASIC14.22□□□□□ -0.13
HOXD12P35452 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HOXD12P35452 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HOXD12P35452 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HOXD12P35452 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HOXD12P35452 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
HOXD12P35452 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HOXD12P35452 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.21□□□□□ -0.13
HOXD12P35452 AC006372.4-201ENST00000624122 1543 ntBASIC14.21□□□□□ -0.13
HOXD12P35452 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
HOXD12P35452 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HOXD12P35452 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.21□□□□□ -0.13
HOXD12P35452 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HOXD12P35452 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.21□□□□□ -0.13
HOXD12P35452 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HOXD12P35452 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
HOXD12P35452 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.21□□□□□ -0.13
HOXD12P35452 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HOXD12P35452 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.21□□□□□ -0.13
HOXD12P35452 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HOXD12P35452 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HOXD12P35452 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HOXD12P35452 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
HOXD12P35452 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
HOXD12P35452 AC083964.2-201ENST00000623988 2396 ntBASIC14.21□□□□□ -0.13
HOXD12P35452 SERF2-206ENST00000409291 807 ntTSL 3 BASIC14.21□□□□□ -0.13
HOXD12P35452 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC14.21□□□□□ -0.13
HOXD12P35452 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC14.21□□□□□ -0.13
HOXD12P35452 AL135901.1-201ENST00000451812 333 ntBASIC14.21□□□□□ -0.13
HOXD12P35452 GNG10P1-201ENST00000452289 199 ntBASIC14.21□□□□□ -0.13
HOXD12P35452 AGPAT5P1-201ENST00000455855 1019 ntBASIC14.21□□□□□ -0.13
HOXD12P35452 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC14.21□□□□□ -0.13
HOXD12P35452 AC068867.1-201ENST00000559855 150 ntBASIC14.21□□□□□ -0.13
HOXD12P35452 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.21□□□□□ -0.13
HOXD12P35452 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.21□□□□□ -0.13
HOXD12P35452 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC14.21□□□□□ -0.13
HOXD12P35452 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.21□□□□□ -0.13
HOXD12P35452 NAMA-206ENST00000605377 509 ntTSL 5 BASIC14.21□□□□□ -0.13
HOXD12P35452 AC021016.3-201ENST00000608367 477 ntBASIC14.21□□□□□ -0.13
HOXD12P35452 AC011471.3-201ENST00000623576 402 ntBASIC14.21□□□□□ -0.13
HOXD12P35452 AC002044.2-201ENST00000624910 970 ntBASIC14.21□□□□□ -0.13
HOXD12P35452 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
HOXD12P35452 AC002472.4-201ENST00000641915 272 ntBASIC14.21□□□□□ -0.13
HOXD12P35452 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HOXD12P35452 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
HOXD12P35452 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HOXD12P35452 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HOXD12P35452 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HOXD12P35452 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.21□□□□□ -0.13
HOXD12P35452 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HOXD12P35452 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.21□□□□□ -0.14
HOXD12P35452 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
HOXD12P35452 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
HOXD12P35452 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
HOXD12P35452 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HOXD12P35452 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HOXD12P35452 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
HOXD12P35452 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
HOXD12P35452 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.21□□□□□ -0.14
HOXD12P35452 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.21□□□□□ -0.14
HOXD12P35452 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HOXD12P35452 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.2□□□□□ -0.14
HOXD12P35452 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HOXD12P35452 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HOXD12P35452 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
HOXD12P35452 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HOXD12P35452 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
HOXD12P35452 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HOXD12P35452 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
HOXD12P35452 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC14.2□□□□□ -0.14
HOXD12P35452 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HOXD12P35452 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms