Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 SHMT1P1-201ENST00000419974 1312 ntBASIC14.97□□□□□ -0.01
RFC1P35251 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RFC1P35251 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFC1P35251 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFC1P35251 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RFC1P35251 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
RFC1P35251 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.97□□□□□ -0.01
RFC1P35251 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.97□□□□□ -0.01
RFC1P35251 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.97□□□□□ -0.01
RFC1P35251 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.97□□□□□ -0.01
RFC1P35251 PFN1P12-201ENST00000455938 534 ntBASIC14.97□□□□□ -0.01
RFC1P35251 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFC1P35251 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.97□□□□□ -0.01
RFC1P35251 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFC1P35251 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.97□□□□□ -0.01
RFC1P35251 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFC1P35251 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFC1P35251 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFC1P35251 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFC1P35251 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFC1P35251 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFC1P35251 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFC1P35251 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFC1P35251 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RFC1P35251 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
RFC1P35251 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFC1P35251 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFC1P35251 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFC1P35251 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFC1P35251 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.97□□□□□ -0.01
RFC1P35251 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFC1P35251 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFC1P35251 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.97□□□□□ -0.01
RFC1P35251 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFC1P35251 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.96□□□□□ -0.01
RFC1P35251 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RFC1P35251 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFC1P35251 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
RFC1P35251 AC015909.5-201ENST00000624336 2266 ntBASIC14.96□□□□□ -0.01
RFC1P35251 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RFC1P35251 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.96□□□□□ -0.01
RFC1P35251 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFC1P35251 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFC1P35251 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RFC1P35251 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RFC1P35251 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.96□□□□□ -0.01
RFC1P35251 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RFC1P35251 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFC1P35251 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.96□□□□□ -0.01
RFC1P35251 AC105206.1-202ENST00000314927 2368 ntBASIC14.96□□□□□ -0.01
RFC1P35251 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
RFC1P35251 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RFC1P35251 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFC1P35251 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFC1P35251 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
RFC1P35251 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFC1P35251 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFC1P35251 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFC1P35251 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFC1P35251 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.96□□□□□ -0.01
RFC1P35251 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RFC1P35251 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.96□□□□□ -0.01
RFC1P35251 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.96□□□□□ -0.01
RFC1P35251 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.96□□□□□ -0.01
RFC1P35251 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.96□□□□□ -0.01
RFC1P35251 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.96□□□□□ -0.01
RFC1P35251 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RFC1P35251 AC004898.1-201ENST00000451057 766 ntBASIC14.96□□□□□ -0.01
RFC1P35251 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.96□□□□□ -0.01
RFC1P35251 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFC1P35251 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFC1P35251 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.96□□□□□ -0.01
RFC1P35251 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFC1P35251 AL451050.2-201ENST00000606967 682 ntBASIC14.96□□□□□ -0.01
RFC1P35251 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.96□□□□□ -0.01
RFC1P35251 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.96□□□□□ -0.01
RFC1P35251 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RFC1P35251 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.96□□□□□ -0.01
RFC1P35251 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RFC1P35251 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFC1P35251 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RFC1P35251 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RFC1P35251 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFC1P35251 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
RFC1P35251 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
RFC1P35251 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.96□□□□□ -0.02
RFC1P35251 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
RFC1P35251 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RFC1P35251 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RFC1P35251 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.96□□□□□ -0.02
RFC1P35251 SON-203ENST00000381679 7860 ntTSL 5 BASIC14.96□□□□□ -0.02
RFC1P35251 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.96□□□□□ -0.02
RFC1P35251 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
RFC1P35251 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
RFC1P35251 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
RFC1P35251 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.95□□□□□ -0.02
RFC1P35251 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.95□□□□□ -0.02
RFC1P35251 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFC1P35251 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.95□□□□□ -0.02
RFC1P35251 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms