Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH3P22223 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.01□□□□□ -0.17
CDH3P22223 AC022447.6-201ENST00000515522 438 ntBASIC14.01□□□□□ -0.17
CDH3P22223 AC245884.6-201ENST00000515672 1067 ntBASIC14.01□□□□□ -0.17
CDH3P22223 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH3P22223 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.01□□□□□ -0.17
CDH3P22223 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CDH3P22223 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH3P22223 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.01□□□□□ -0.17
CDH3P22223 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH3P22223 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDH3P22223 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CDH3P22223 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CDH3P22223 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.01□□□□□ -0.17
CDH3P22223 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH3P22223 AC092299.1-201ENST00000632679 757 ntBASIC14.01□□□□□ -0.17
CDH3P22223 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.01□□□□□ -0.17
CDH3P22223 AC138627.1-207ENST00000641560 1006 ntBASIC14.01□□□□□ -0.17
CDH3P22223 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH3P22223 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH3P22223 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CDH3P22223 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH3P22223 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDH3P22223 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDH3P22223 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CDH3P22223 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH3P22223 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH3P22223 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH3P22223 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
CDH3P22223 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
CDH3P22223 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH3P22223 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH3P22223 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDH3P22223 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.01□□□□□ -0.17
CDH3P22223 AC018629.1-201ENST00000623381 1736 ntBASIC14.01□□□□□ -0.17
CDH3P22223 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
CDH3P22223 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH3P22223 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
CDH3P22223 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH3P22223 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH3P22223 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH3P22223 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14□□□□□ -0.17
CDH3P22223 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH3P22223 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH3P22223 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
CDH3P22223 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC14□□□□□ -0.17
CDH3P22223 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDH3P22223 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDH3P22223 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CDH3P22223 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
CDH3P22223 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDH3P22223 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH3P22223 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH3P22223 AC008132.1-202ENST00000342005 1389 ntBASIC14□□□□□ -0.17
CDH3P22223 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH3P22223 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14□□□□□ -0.17
CDH3P22223 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDH3P22223 AHCYP4-201ENST00000419201 1315 ntBASIC14□□□□□ -0.17
CDH3P22223 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14□□□□□ -0.17
CDH3P22223 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH3P22223 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14□□□□□ -0.17
CDH3P22223 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14□□□□□ -0.17
CDH3P22223 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CDH3P22223 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDH3P22223 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14□□□□□ -0.17
CDH3P22223 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14□□□□□ -0.17
CDH3P22223 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14□□□□□ -0.17
CDH3P22223 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14□□□□□ -0.17
CDH3P22223 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14□□□□□ -0.17
CDH3P22223 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14□□□□□ -0.17
CDH3P22223 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
CDH3P22223 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14□□□□□ -0.17
CDH3P22223 AC068587.10-201ENST00000641210 219 ntBASIC14□□□□□ -0.17
CDH3P22223 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDH3P22223 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CDH3P22223 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC14□□□□□ -0.17
CDH3P22223 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH3P22223 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH3P22223 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH3P22223 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14□□□□□ -0.17
CDH3P22223 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC14□□□□□ -0.17
CDH3P22223 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDH3P22223 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14□□□□□ -0.17
CDH3P22223 AGGF1P1-201ENST00000509500 2073 ntBASIC14□□□□□ -0.17
CDH3P22223 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDH3P22223 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CDH3P22223 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CDH3P22223 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH3P22223 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14□□□□□ -0.17
CDH3P22223 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH3P22223 KRT8P21-201ENST00000430398 1491 ntBASIC13.99□□□□□ -0.17
CDH3P22223 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
CDH3P22223 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH3P22223 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDH3P22223 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
CDH3P22223 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH3P22223 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDH3P22223 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH3P22223 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDH3P22223 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms