Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 AC239868.1-201ENST00000369385 493 ntBASIC14.32□□□□□ -0.12
HLA-DPA1P20036 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 KRT8P13-201ENST00000463294 1010 ntBASIC14.32□□□□□ -0.12
HLA-DPA1P20036 CHCHD2P2-201ENST00000503744 321 ntBASIC14.32□□□□□ -0.12
HLA-DPA1P20036 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 GPR182-203ENST00000622922 591 ntBASIC14.32□□□□□ -0.12
HLA-DPA1P20036 CR392039.2-201ENST00000623182 509 ntBASIC14.32□□□□□ -0.12
HLA-DPA1P20036 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 AL157791.1-201ENST00000553667 1699 ntBASIC14.32□□□□□ -0.12
HLA-DPA1P20036 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPA1P20036 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 AL139158.3-201ENST00000641212 1562 ntBASIC14.31□□□□□ -0.12
HLA-DPA1P20036 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 RPS9P1-201ENST00000419943 583 ntBASIC14.31□□□□□ -0.12
HLA-DPA1P20036 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 SCARNA20.5-201ENST00000516991 142 ntBASIC14.31□□□□□ -0.12
HLA-DPA1P20036 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.31□□□□□ -0.12
HLA-DPA1P20036 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 SON-203ENST00000381679 7860 ntTSL 5 BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 AC138028.6-201ENST00000616106 1482 ntBASIC14.31□□□□□ -0.12
HLA-DPA1P20036 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPA1P20036 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 AC072061.1-201ENST00000569710 2234 ntBASIC14.3□□□□□ -0.12
HLA-DPA1P20036 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms