Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2B1P20020 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2B1P20020 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2B1P20020 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2B1P20020 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2B1P20020 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2B1P20020 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC16.41■□□□□ 0.22
ATP2B1P20020 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2B1P20020 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2B1P20020 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2B1P20020 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2B1P20020 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2B1P20020 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2B1P20020 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
ATP2B1P20020 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
ATP2B1P20020 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP2B1P20020 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.4■□□□□ 0.22
ATP2B1P20020 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
ATP2B1P20020 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP2B1P20020 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2B1P20020 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2B1P20020 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ATP2B1P20020 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2B1P20020 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2B1P20020 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC16.4■□□□□ 0.22
ATP2B1P20020 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
ATP2B1P20020 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP2B1P20020 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
ATP2B1P20020 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2B1P20020 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2B1P20020 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP2B1P20020 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP2B1P20020 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.4■□□□□ 0.22
ATP2B1P20020 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2B1P20020 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.4■□□□□ 0.22
ATP2B1P20020 AC005740.2-201ENST00000511085 419 ntBASIC16.4■□□□□ 0.22
ATP2B1P20020 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ATP2B1P20020 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.4■□□□□ 0.22
ATP2B1P20020 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.4■□□□□ 0.22
ATP2B1P20020 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP2B1P20020 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2B1P20020 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.4■□□□□ 0.22
ATP2B1P20020 AL591471.1-201ENST00000621855 229 ntBASIC16.4■□□□□ 0.22
ATP2B1P20020 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
ATP2B1P20020 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2B1P20020 EML1-203ENST00000334192 4064 ntTSL 5 BASIC16.4■□□□□ 0.22
ATP2B1P20020 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ATP2B1P20020 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2B1P20020 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2B1P20020 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2B1P20020 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC16.4■□□□□ 0.22
ATP2B1P20020 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2B1P20020 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP2B1P20020 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC16.4■□□□□ 0.22
ATP2B1P20020 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP2B1P20020 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2B1P20020 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2B1P20020 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2B1P20020 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP2B1P20020 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2B1P20020 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2B1P20020 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
ATP2B1P20020 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC16.39■□□□□ 0.22
ATP2B1P20020 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
ATP2B1P20020 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP2B1P20020 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
ATP2B1P20020 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
ATP2B1P20020 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP2B1P20020 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP2B1P20020 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP2B1P20020 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP2B1P20020 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP2B1P20020 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC16.39■□□□□ 0.21
ATP2B1P20020 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ATP2B1P20020 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC16.39■□□□□ 0.21
ATP2B1P20020 AP002353.1-201ENST00000528257 1599 ntBASIC16.39■□□□□ 0.21
ATP2B1P20020 HAL-202ENST00000538703 2637 ntTSL 2 BASIC16.39■□□□□ 0.21
ATP2B1P20020 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ATP2B1P20020 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP2B1P20020 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP2B1P20020 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP2B1P20020 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ATP2B1P20020 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP2B1P20020 DPM3-202ENST00000368399 517 ntBASIC16.39■□□□□ 0.21
ATP2B1P20020 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.39■□□□□ 0.21
ATP2B1P20020 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
ATP2B1P20020 NKAIN1P1-201ENST00000435754 582 ntBASIC16.39■□□□□ 0.21
ATP2B1P20020 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATP2B1P20020 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.39■□□□□ 0.21
ATP2B1P20020 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.39■□□□□ 0.21
ATP2B1P20020 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.39■□□□□ 0.21
ATP2B1P20020 SERPINA13P-202ENST00000478994 924 ntBASIC16.39■□□□□ 0.21
ATP2B1P20020 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.39■□□□□ 0.21
ATP2B1P20020 SNORD3B-2-202ENST00000571722 791 ntBASIC16.39■□□□□ 0.21
ATP2B1P20020 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.39■□□□□ 0.21
ATP2B1P20020 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.39■□□□□ 0.21
ATP2B1P20020 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.39■□□□□ 0.21
ATP2B1P20020 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATP2B1P20020 AC090386.2-201ENST00000623010 1039 ntBASIC16.39■□□□□ 0.21
ATP2B1P20020 AL008638.5-201ENST00000623814 1298 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms