Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD48P09326 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD48P09326 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD48P09326 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CD48P09326 LINC00638-201ENST00000555578 2518 ntBASIC14.67□□□□□ -0.06
CD48P09326 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC14.67□□□□□ -0.06
CD48P09326 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD48P09326 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.67□□□□□ -0.06
CD48P09326 FMO6P-201ENST00000236166 1620 ntBASIC14.67□□□□□ -0.06
CD48P09326 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.67□□□□□ -0.06
CD48P09326 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.67□□□□□ -0.06
CD48P09326 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD48P09326 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD48P09326 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD48P09326 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD48P09326 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD48P09326 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD48P09326 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD48P09326 AC067931.2-201ENST00000623655 2003 ntBASIC14.67□□□□□ -0.06
CD48P09326 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD48P09326 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD48P09326 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD48P09326 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD48P09326 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD48P09326 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD48P09326 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.67□□□□□ -0.06
CD48P09326 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
CD48P09326 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.67□□□□□ -0.06
CD48P09326 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.67□□□□□ -0.06
CD48P09326 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD48P09326 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.67□□□□□ -0.06
CD48P09326 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.67□□□□□ -0.06
CD48P09326 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.67□□□□□ -0.06
CD48P09326 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD48P09326 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.67□□□□□ -0.06
CD48P09326 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD48P09326 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
CD48P09326 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD48P09326 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CD48P09326 AC008620.2-201ENST00000510294 1569 ntBASIC14.67□□□□□ -0.06
CD48P09326 AL139158.3-201ENST00000641212 1562 ntBASIC14.67□□□□□ -0.06
CD48P09326 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD48P09326 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD48P09326 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD48P09326 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.67□□□□□ -0.06
CD48P09326 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.67□□□□□ -0.06
CD48P09326 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD48P09326 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD48P09326 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD48P09326 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
CD48P09326 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD48P09326 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD48P09326 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.66□□□□□ -0.06
CD48P09326 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD48P09326 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC14.66□□□□□ -0.06
CD48P09326 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD48P09326 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
CD48P09326 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC14.66□□□□□ -0.06
CD48P09326 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD48P09326 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.66□□□□□ -0.06
CD48P09326 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CD48P09326 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD48P09326 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD48P09326 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.66□□□□□ -0.06
CD48P09326 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD48P09326 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CD48P09326 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.66□□□□□ -0.06
CD48P09326 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC14.66□□□□□ -0.06
CD48P09326 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.66□□□□□ -0.06
CD48P09326 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.66□□□□□ -0.06
CD48P09326 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD48P09326 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD48P09326 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD48P09326 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD48P09326 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.66□□□□□ -0.06
CD48P09326 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD48P09326 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.66□□□□□ -0.06
CD48P09326 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
CD48P09326 ACTBP11-201ENST00000436287 1126 ntBASIC14.66□□□□□ -0.06
CD48P09326 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.66□□□□□ -0.06
CD48P09326 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.66□□□□□ -0.06
CD48P09326 AC004898.1-201ENST00000451057 766 ntBASIC14.66□□□□□ -0.06
CD48P09326 GOLGA2P8-201ENST00000505201 779 ntBASIC14.66□□□□□ -0.06
CD48P09326 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.66□□□□□ -0.06
CD48P09326 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.66□□□□□ -0.06
CD48P09326 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.66□□□□□ -0.06
CD48P09326 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.66□□□□□ -0.06
CD48P09326 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.66□□□□□ -0.06
CD48P09326 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD48P09326 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CD48P09326 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.66□□□□□ -0.06
CD48P09326 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.66□□□□□ -0.06
CD48P09326 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CD48P09326 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD48P09326 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CD48P09326 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC14.66□□□□□ -0.06
CD48P09326 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD48P09326 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CD48P09326 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CD48P09326 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms