Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
MT-ND1P03886 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MT-ND1P03886 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
MT-ND1P03886 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.44□□□□□ -0.26
MT-ND1P03886 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.44□□□□□ -0.26
MT-ND1P03886 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.44□□□□□ -0.26
MT-ND1P03886 AC104758.3-203ENST00000562938 2123 ntBASIC13.44□□□□□ -0.26
MT-ND1P03886 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.44□□□□□ -0.26
MT-ND1P03886 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.44□□□□□ -0.26
MT-ND1P03886 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.44□□□□□ -0.26
MT-ND1P03886 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.44□□□□□ -0.26
MT-ND1P03886 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
MT-ND1P03886 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
MT-ND1P03886 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
MT-ND1P03886 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MT-ND1P03886 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
MT-ND1P03886 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC13.44□□□□□ -0.26
MT-ND1P03886 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC13.44□□□□□ -0.26
MT-ND1P03886 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
MT-ND1P03886 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
MT-ND1P03886 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MT-ND1P03886 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
MT-ND1P03886 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.44□□□□□ -0.26
MT-ND1P03886 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.44□□□□□ -0.26
MT-ND1P03886 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MT-ND1P03886 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.44□□□□□ -0.26
MT-ND1P03886 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MT-ND1P03886 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MT-ND1P03886 PER1-202ENST00000354903 3115 ntTSL 2 BASIC13.44□□□□□ -0.26
MT-ND1P03886 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
MT-ND1P03886 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MT-ND1P03886 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC13.43□□□□□ -0.26
MT-ND1P03886 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MT-ND1P03886 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
MT-ND1P03886 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
MT-ND1P03886 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MT-ND1P03886 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.43□□□□□ -0.26
MT-ND1P03886 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.43□□□□□ -0.26
MT-ND1P03886 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MT-ND1P03886 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
MT-ND1P03886 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
MT-ND1P03886 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
MT-ND1P03886 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.43□□□□□ -0.26
MT-ND1P03886 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
MT-ND1P03886 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
MT-ND1P03886 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC13.43□□□□□ -0.26
MT-ND1P03886 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MT-ND1P03886 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
MT-ND1P03886 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
MT-ND1P03886 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MT-ND1P03886 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
MT-ND1P03886 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MT-ND1P03886 DGCR5-201ENST00000399539 862 ntBASIC13.43□□□□□ -0.26
MT-ND1P03886 POM121L14P-201ENST00000406100 1558 ntBASIC13.43□□□□□ -0.26
MT-ND1P03886 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.43□□□□□ -0.26
MT-ND1P03886 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
MT-ND1P03886 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
MT-ND1P03886 AL021155.1-201ENST00000438808 2637 ntBASIC13.43□□□□□ -0.26
MT-ND1P03886 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.43□□□□□ -0.26
MT-ND1P03886 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.43□□□□□ -0.26
MT-ND1P03886 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.43□□□□□ -0.26
MT-ND1P03886 TERF1P3-201ENST00000505638 1227 ntBASIC13.43□□□□□ -0.26
MT-ND1P03886 FTLP10-202ENST00000505798 471 ntBASIC13.43□□□□□ -0.26
MT-ND1P03886 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.43□□□□□ -0.26
MT-ND1P03886 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.43□□□□□ -0.26
MT-ND1P03886 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.43□□□□□ -0.26
MT-ND1P03886 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
MT-ND1P03886 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.43□□□□□ -0.26
MT-ND1P03886 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.43□□□□□ -0.26
MT-ND1P03886 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.43□□□□□ -0.26
MT-ND1P03886 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.43□□□□□ -0.26
MT-ND1P03886 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MT-ND1P03886 MIR4745-201ENST00000577608 62 ntBASIC13.43□□□□□ -0.26
MT-ND1P03886 KRT18P8-201ENST00000581937 1246 ntBASIC13.43□□□□□ -0.26
MT-ND1P03886 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.43□□□□□ -0.26
MT-ND1P03886 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
MT-ND1P03886 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
MT-ND1P03886 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MT-ND1P03886 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
MT-ND1P03886 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
MT-ND1P03886 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
MT-ND1P03886 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC13.43□□□□□ -0.26
MT-ND1P03886 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
MT-ND1P03886 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC13.43□□□□□ -0.26
MT-ND1P03886 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.43□□□□□ -0.26
MT-ND1P03886 DLX4-206ENST00000611342 1662 ntBASIC13.43□□□□□ -0.26
MT-ND1P03886 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC13.43□□□□□ -0.26
MT-ND1P03886 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
MT-ND1P03886 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.43□□□□□ -0.26
MT-ND1P03886 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MT-ND1P03886 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MT-ND1P03886 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC13.43□□□□□ -0.26
MT-ND1P03886 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
MT-ND1P03886 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MT-ND1P03886 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
MT-ND1P03886 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
MT-ND1P03886 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MT-ND1P03886 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
MT-ND1P03886 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
MT-ND1P03886 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms