Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.7□□□□□ -0.38
ZIC3O60481 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ZIC3O60481 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.69□□□□□ -0.38
ZIC3O60481 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ZIC3O60481 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ZIC3O60481 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.69□□□□□ -0.38
ZIC3O60481 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ZIC3O60481 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZIC3O60481 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZIC3O60481 AC111170.3-201ENST00000624282 2464 ntBASIC12.69□□□□□ -0.38
ZIC3O60481 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZIC3O60481 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
ZIC3O60481 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZIC3O60481 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.69□□□□□ -0.38
ZIC3O60481 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ZIC3O60481 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
ZIC3O60481 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZIC3O60481 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZIC3O60481 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
ZIC3O60481 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZIC3O60481 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ZIC3O60481 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC12.69□□□□□ -0.38
ZIC3O60481 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC12.69□□□□□ -0.38
ZIC3O60481 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ZIC3O60481 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ZIC3O60481 HINT2P1-201ENST00000419438 481 ntBASIC12.69□□□□□ -0.38
ZIC3O60481 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC12.69□□□□□ -0.38
ZIC3O60481 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ZIC3O60481 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC12.69□□□□□ -0.38
ZIC3O60481 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ZIC3O60481 ERP29P1-201ENST00000442902 706 ntBASIC12.69□□□□□ -0.38
ZIC3O60481 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12.69□□□□□ -0.38
ZIC3O60481 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC12.69□□□□□ -0.38
ZIC3O60481 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC12.69□□□□□ -0.38
ZIC3O60481 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ZIC3O60481 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
ZIC3O60481 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC12.69□□□□□ -0.38
ZIC3O60481 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC12.69□□□□□ -0.38
ZIC3O60481 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC12.69□□□□□ -0.38
ZIC3O60481 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC12.69□□□□□ -0.38
ZIC3O60481 AC242376.2-201ENST00000619355 883 ntBASIC12.69□□□□□ -0.38
ZIC3O60481 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC12.69□□□□□ -0.38
ZIC3O60481 AL805961.1-201ENST00000642026 753 ntBASIC12.69□□□□□ -0.38
ZIC3O60481 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.69□□□□□ -0.38
ZIC3O60481 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ZIC3O60481 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.69□□□□□ -0.38
ZIC3O60481 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
ZIC3O60481 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZIC3O60481 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZIC3O60481 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
ZIC3O60481 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZIC3O60481 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ZIC3O60481 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZIC3O60481 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.69□□□□□ -0.38
ZIC3O60481 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZIC3O60481 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ZIC3O60481 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZIC3O60481 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
ZIC3O60481 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
ZIC3O60481 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ZIC3O60481 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.69□□□□□ -0.38
ZIC3O60481 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
ZIC3O60481 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZIC3O60481 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZIC3O60481 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
ZIC3O60481 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ZIC3O60481 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZIC3O60481 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZIC3O60481 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ZIC3O60481 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC12.68□□□□□ -0.38
ZIC3O60481 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
ZIC3O60481 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZIC3O60481 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
ZIC3O60481 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
ZIC3O60481 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZIC3O60481 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZIC3O60481 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZIC3O60481 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZIC3O60481 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZIC3O60481 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.68□□□□□ -0.38
ZIC3O60481 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.68□□□□□ -0.38
ZIC3O60481 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
ZIC3O60481 PYY2-201ENST00000315776 282 ntBASIC12.68□□□□□ -0.38
ZIC3O60481 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZIC3O60481 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ZIC3O60481 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC12.68□□□□□ -0.38
ZIC3O60481 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZIC3O60481 GGCT-203ENST00000409144 836 ntTSL 2 BASIC12.68□□□□□ -0.38
ZIC3O60481 GUSBP10-201ENST00000417412 665 ntBASIC12.68□□□□□ -0.38
ZIC3O60481 HPGD-203ENST00000422112 805 ntTSL 2 BASIC12.68□□□□□ -0.38
ZIC3O60481 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC12.68□□□□□ -0.38
ZIC3O60481 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
ZIC3O60481 TMEM198B-204ENST00000484016 896 ntBASIC12.68□□□□□ -0.38
ZIC3O60481 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC12.68□□□□□ -0.38
ZIC3O60481 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ZIC3O60481 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC12.68□□□□□ -0.38
ZIC3O60481 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC12.68□□□□□ -0.38
ZIC3O60481 HERC2P11-201ENST00000562845 725 ntBASIC12.68□□□□□ -0.38
ZIC3O60481 AC100756.2-201ENST00000569537 736 ntBASIC12.68□□□□□ -0.38
ZIC3O60481 AC132825.4-202ENST00000578792 434 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms