Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.17□□□□□ -0.46
TMEM235A6NFC5 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 AL035414.1-201ENST00000451327 857 ntBASIC12.17□□□□□ -0.46
TMEM235A6NFC5 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 AC093214.1-201ENST00000511688 1107 ntBASIC12.17□□□□□ -0.46
TMEM235A6NFC5 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 AP001160.2-201ENST00000596071 487 ntBASIC12.17□□□□□ -0.46
TMEM235A6NFC5 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 CR392039.2-201ENST00000623182 509 ntBASIC12.17□□□□□ -0.46
TMEM235A6NFC5 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 AC108024.1-201ENST00000626286 1721 ntBASIC12.17□□□□□ -0.46
TMEM235A6NFC5 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 AL138709.1-201ENST00000614840 1693 ntBASIC12.16□□□□□ -0.46
TMEM235A6NFC5 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 REXO1L1P-201ENST00000379010 6598 ntBASIC12.16□□□□□ -0.46
TMEM235A6NFC5 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 AP003969.2-201ENST00000623739 2275 ntBASIC12.16□□□□□ -0.46
TMEM235A6NFC5 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 ELK1P1-201ENST00000485699 580 ntBASIC12.16□□□□□ -0.46
TMEM235A6NFC5 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.16□□□□□ -0.46
TMEM235A6NFC5 AC010970.1-201ENST00000445125 1848 ntBASIC12.16□□□□□ -0.46
TMEM235A6NFC5 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms