Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 PSAT1P2-201ENST00000426107 972 ntBASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 GALP-202ENST00000440823 889 ntTSL 5 BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 STK24P1-201ENST00000455035 1291 ntBASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 AC106047.2-201ENST00000511723 743 ntBASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 DLK1-205ENST00000556051 469 ntTSL 2 BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 ABHD17AP9-201ENST00000561925 548 ntBASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 PHB-210ENST00000511832 1509 ntTSL 2 BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 AC106881.1-201ENST00000605849 3329 ntBASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 AL590824.1-201ENST00000403828 1349 ntBASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 SHMT1P1-201ENST00000419974 1312 ntBASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.37□□□□□ -0.27
CCDC187A0A096LP49 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 RPL3P2-204ENST00000413027 1203 ntBASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 AC073210.1-201ENST00000414799 232 ntBASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 AL512599.1-201ENST00000430724 685 ntBASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 AC018695.6-201ENST00000614011 534 ntBASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 AP000769.1-203ENST00000637245 208 ntBASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 FGD5P1-202ENST00000614866 2498 ntBASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CCDC187A0A096LP49 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC187A0A096LP49 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms