Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 AGAP10P-201ENST00000454844 2418 ntBASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 AC103592.1-201ENST00000394513 664 ntBASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 RPS9P1-201ENST00000419943 583 ntBASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 RPL8P2-201ENST00000430538 502 ntBASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 RPSAP15-201ENST00000448168 861 ntBASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 PRKXP1-201ENST00000561423 1122 ntBASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 MIR3677-201ENST00000578964 60 ntBASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 AC007718.1-201ENST00000621078 280 ntBASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 KRT18P9-201ENST00000604826 1300 ntBASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COL4A3BPQ9Y5P4 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 HMGA1P1-201ENST00000415560 1062 ntBASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 AL353726.2-201ENST00000623259 884 ntBASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 AL590824.1-201ENST00000403828 1349 ntBASIC15.85■□□□□ 0.13
COL4A3BPQ9Y5P4 SHMT1P1-201ENST00000419974 1312 ntBASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms