Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 AP002761.4-201ENST00000565433 3361 ntBASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 AC103592.1-201ENST00000394513 664 ntBASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 AC125807.2-201ENST00000513358 3514 ntBASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 PCDHA6-201ENST00000378126 3267 ntBASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 CES1P1-201ENST00000421606 1704 ntBASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAF6Q9Y4K3 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 BEND3P3-201ENST00000611030 2440 ntBASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 SALL4P6-201ENST00000429385 1691 ntBASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 CNN2P10-201ENST00000443067 918 ntBASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 AC022217.1-201ENST00000521069 738 ntBASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
TRAF6Q9Y4K3 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms