Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SHANK2Q9UPX8 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SHANK2Q9UPX8 SERF2-204ENST00000402131 586 ntTSL 2 BASIC20.38■□□□□ 0.85
SHANK2Q9UPX8 MAGEA7P-201ENST00000436482 942 ntBASIC20.38■□□□□ 0.85
SHANK2Q9UPX8 AC108724.1-201ENST00000481669 352 ntBASIC20.38■□□□□ 0.85
SHANK2Q9UPX8 RN7SL523P-201ENST00000484401 298 ntBASIC20.38■□□□□ 0.85
SHANK2Q9UPX8 MIR2278-201ENST00000516344 96 ntBASIC20.38■□□□□ 0.85
SHANK2Q9UPX8 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC20.38■□□□□ 0.85
SHANK2Q9UPX8 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC20.38■□□□□ 0.85
SHANK2Q9UPX8 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SHANK2Q9UPX8 AC048382.6-201ENST00000621980 1223 ntBASIC20.38■□□□□ 0.85
SHANK2Q9UPX8 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SHANK2Q9UPX8 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SHANK2Q9UPX8 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC20.38■□□□□ 0.85
SHANK2Q9UPX8 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SHANK2Q9UPX8 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC20.38■□□□□ 0.85
SHANK2Q9UPX8 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SHANK2Q9UPX8 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SHANK2Q9UPX8 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SHANK2Q9UPX8 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SHANK2Q9UPX8 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC20.38■□□□□ 0.85
SHANK2Q9UPX8 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SHANK2Q9UPX8 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SHANK2Q9UPX8 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SHANK2Q9UPX8 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
SHANK2Q9UPX8 CCL19-202ENST00000378800 414 ntTSL 2 BASIC20.37■□□□□ 0.85
SHANK2Q9UPX8 AC098657.1-201ENST00000416270 1135 ntBASIC20.37■□□□□ 0.85
SHANK2Q9UPX8 FAM197Y6-201ENST00000420524 766 ntBASIC20.37■□□□□ 0.85
SHANK2Q9UPX8 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC20.37■□□□□ 0.85
SHANK2Q9UPX8 RN7SL602P-201ENST00000578326 324 ntBASIC20.37■□□□□ 0.85
SHANK2Q9UPX8 RN7SL718P-201ENST00000581254 303 ntBASIC20.37■□□□□ 0.85
SHANK2Q9UPX8 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SHANK2Q9UPX8 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC20.37■□□□□ 0.85
SHANK2Q9UPX8 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SHANK2Q9UPX8 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SHANK2Q9UPX8 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SHANK2Q9UPX8 KRT8P38-201ENST00000441370 1430 ntBASIC20.37■□□□□ 0.85
SHANK2Q9UPX8 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SHANK2Q9UPX8 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC20.37■□□□□ 0.85
SHANK2Q9UPX8 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC20.37■□□□□ 0.85
SHANK2Q9UPX8 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC20.37■□□□□ 0.85
SHANK2Q9UPX8 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SHANK2Q9UPX8 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SHANK2Q9UPX8 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SHANK2Q9UPX8 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
SHANK2Q9UPX8 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SHANK2Q9UPX8 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SHANK2Q9UPX8 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SHANK2Q9UPX8 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC20.37■□□□□ 0.85
SHANK2Q9UPX8 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC20.37■□□□□ 0.85
SHANK2Q9UPX8 GH1-203ENST00000351388 685 ntTSL 2 BASIC20.37■□□□□ 0.85
SHANK2Q9UPX8 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SHANK2Q9UPX8 OLA1P2-201ENST00000395519 1264 ntBASIC20.37■□□□□ 0.85
SHANK2Q9UPX8 SNORD23-201ENST00000408876 110 ntBASIC20.37■□□□□ 0.85
SHANK2Q9UPX8 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SHANK2Q9UPX8 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SHANK2Q9UPX8 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 HSD3BP1-201ENST00000286193 1111 ntBASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 AIG1-203ENST00000367596 559 ntTSL 2 BASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 AL121949.3-201ENST00000406684 385 ntBASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 SNORA50D-201ENST00000408059 134 ntBASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 PSME2P2-201ENST00000453033 700 ntBASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 PRR20FP-201ENST00000603320 180 ntBASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 PSME2-217ENST00000615264 874 ntTSL 5 BASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 PSME2-218ENST00000630027 185 ntTSL 3 BASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHANK2Q9UPX8 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC20.35■□□□□ 0.85
SHANK2Q9UPX8 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SHANK2Q9UPX8 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHANK2Q9UPX8 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SHANK2Q9UPX8 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SHANK2Q9UPX8 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC20.35■□□□□ 0.85
SHANK2Q9UPX8 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms