Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC15.83■□□□□ 0.12
COL20A1Q9P218 COQ4-204ENST00000608951 781 ntTSL 2 BASIC15.83■□□□□ 0.12
COL20A1Q9P218 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL20A1Q9P218 CTBP2P8-201ENST00000422584 1330 ntBASIC15.83■□□□□ 0.12
COL20A1Q9P218 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COL20A1Q9P218 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COL20A1Q9P218 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL20A1Q9P218 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
COL20A1Q9P218 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL20A1Q9P218 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
COL20A1Q9P218 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.83■□□□□ 0.12
COL20A1Q9P218 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.83■□□□□ 0.12
COL20A1Q9P218 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.82■□□□□ 0.12
COL20A1Q9P218 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
COL20A1Q9P218 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC15.82■□□□□ 0.12
COL20A1Q9P218 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.82■□□□□ 0.12
COL20A1Q9P218 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL20A1Q9P218 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL20A1Q9P218 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL20A1Q9P218 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL20A1Q9P218 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL20A1Q9P218 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC15.82■□□□□ 0.12
COL20A1Q9P218 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL20A1Q9P218 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL20A1Q9P218 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL20A1Q9P218 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL20A1Q9P218 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
COL20A1Q9P218 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL20A1Q9P218 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
COL20A1Q9P218 GGTLC4P-201ENST00000402176 664 ntBASIC15.82■□□□□ 0.12
COL20A1Q9P218 KRT18P37-201ENST00000520711 1282 ntBASIC15.82■□□□□ 0.12
COL20A1Q9P218 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC15.82■□□□□ 0.12
COL20A1Q9P218 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC15.82■□□□□ 0.12
COL20A1Q9P218 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
COL20A1Q9P218 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL20A1Q9P218 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC15.82■□□□□ 0.12
COL20A1Q9P218 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL20A1Q9P218 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL20A1Q9P218 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL20A1Q9P218 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC15.82■□□□□ 0.12
COL20A1Q9P218 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL20A1Q9P218 NRADDP-202ENST00000641269 1585 ntBASIC15.82■□□□□ 0.12
COL20A1Q9P218 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL20A1Q9P218 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL20A1Q9P218 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL20A1Q9P218 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL20A1Q9P218 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL20A1Q9P218 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL20A1Q9P218 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL20A1Q9P218 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
COL20A1Q9P218 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
COL20A1Q9P218 AC089987.1-201ENST00000551654 2209 ntBASIC15.82■□□□□ 0.12
COL20A1Q9P218 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC15.82■□□□□ 0.12
COL20A1Q9P218 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL20A1Q9P218 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL20A1Q9P218 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.81■□□□□ 0.12
COL20A1Q9P218 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
COL20A1Q9P218 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
COL20A1Q9P218 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
COL20A1Q9P218 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
COL20A1Q9P218 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL20A1Q9P218 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL20A1Q9P218 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL20A1Q9P218 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL20A1Q9P218 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COL20A1Q9P218 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL20A1Q9P218 MIR1307-201ENST00000408840 149 ntBASIC15.81■□□□□ 0.12
COL20A1Q9P218 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COL20A1Q9P218 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC15.81■□□□□ 0.12
COL20A1Q9P218 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
COL20A1Q9P218 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC15.81■□□□□ 0.12
COL20A1Q9P218 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL20A1Q9P218 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
COL20A1Q9P218 KRT18P62-201ENST00000446618 1287 ntBASIC15.81■□□□□ 0.12
COL20A1Q9P218 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC15.81■□□□□ 0.12
COL20A1Q9P218 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COL20A1Q9P218 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COL20A1Q9P218 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
COL20A1Q9P218 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.81■□□□□ 0.12
COL20A1Q9P218 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.81■□□□□ 0.12
COL20A1Q9P218 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL20A1Q9P218 MT2A-202ENST00000561491 581 ntTSL 2 BASIC15.81■□□□□ 0.12
COL20A1Q9P218 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC15.81■□□□□ 0.12
COL20A1Q9P218 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL20A1Q9P218 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.81■□□□□ 0.12
COL20A1Q9P218 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC15.81■□□□□ 0.12
COL20A1Q9P218 AL139424.3-202ENST00000641619 917 ntBASIC15.81■□□□□ 0.12
COL20A1Q9P218 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL20A1Q9P218 PCDHA3-202ENST00000532566 4594 ntBASIC15.81■□□□□ 0.12
COL20A1Q9P218 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL20A1Q9P218 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL20A1Q9P218 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.81■□□□□ 0.12
COL20A1Q9P218 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL20A1Q9P218 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.81■□□□□ 0.12
COL20A1Q9P218 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL20A1Q9P218 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL20A1Q9P218 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
COL20A1Q9P218 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC15.8■□□□□ 0.12
COL20A1Q9P218 Z98885.3-201ENST00000624882 1757 ntBASIC15.8■□□□□ 0.12
COL20A1Q9P218 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms