Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 KRT8P18-201ENST00000413425 1445 ntBASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 FTX-216ENST00000638985 1367 ntTSL 5 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 MFSD8-213ENST00000641134 1327 ntBASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 AC067930.6-201ENST00000623257 4947 ntBASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 HLA-DMA-203ENST00000395305 777 ntBASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 AL357563.1-201ENST00000404728 395 ntBASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 RPL3P2-204ENST00000413027 1203 ntBASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 AC018463.1-201ENST00000456674 917 ntBASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 PPIA-208ENST00000489459 907 ntTSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 RN7SL564P-201ENST00000496309 250 ntBASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 LINC00634-202ENST00000505157 222 ntBASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 TREHP1-201ENST00000531328 465 ntBASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 AC068867.1-201ENST00000559855 150 ntBASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms