Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AL031719.1-201ENST00000623365 2587 ntBASIC11.57□□□□□ -0.56
RAB40CQ96S21 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC11.57□□□□□ -0.56
RAB40CQ96S21 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
RAB40CQ96S21 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 SPDYE19P-201ENST00000338590 713 ntBASIC11.57□□□□□ -0.56
RAB40CQ96S21 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC11.57□□□□□ -0.56
RAB40CQ96S21 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
RAB40CQ96S21 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
RAB40CQ96S21 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
RAB40CQ96S21 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC11.57□□□□□ -0.56
RAB40CQ96S21 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC11.57□□□□□ -0.56
RAB40CQ96S21 MYCLP2-201ENST00000449268 967 ntBASIC11.57□□□□□ -0.56
RAB40CQ96S21 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC11.57□□□□□ -0.56
RAB40CQ96S21 KRT18P15-201ENST00000458108 1291 ntBASIC11.57□□□□□ -0.56
RAB40CQ96S21 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 AC011495.1-201ENST00000498085 584 ntBASIC11.57□□□□□ -0.56
RAB40CQ96S21 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 CDC23-208ENST00000505120 455 ntTSL 3 BASIC11.57□□□□□ -0.56
RAB40CQ96S21 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC11.57□□□□□ -0.56
RAB40CQ96S21 ENPP7P5-201ENST00000541031 1031 ntBASIC11.57□□□□□ -0.56
RAB40CQ96S21 AL359711.2-201ENST00000563105 872 ntBASIC11.57□□□□□ -0.56
RAB40CQ96S21 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
RAB40CQ96S21 AC099568.2-201ENST00000609194 695 ntBASIC11.57□□□□□ -0.56
RAB40CQ96S21 AJ011932.1-201ENST00000621707 465 ntBASIC11.57□□□□□ -0.56
RAB40CQ96S21 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC11.57□□□□□ -0.56
RAB40CQ96S21 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 AC010336.1-201ENST00000539278 4739 ntBASIC11.57□□□□□ -0.56
RAB40CQ96S21 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
RAB40CQ96S21 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC11.57□□□□□ -0.56
RAB40CQ96S21 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC11.57□□□□□ -0.56
RAB40CQ96S21 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB40CQ96S21 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB40CQ96S21 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
RAB40CQ96S21 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
RAB40CQ96S21 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
RAB40CQ96S21 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC11.56□□□□□ -0.56
RAB40CQ96S21 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
RAB40CQ96S21 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB40CQ96S21 HNRNPA1P48-201ENST00000562726 1377 ntBASIC11.56□□□□□ -0.56
RAB40CQ96S21 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB40CQ96S21 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC11.56□□□□□ -0.56
RAB40CQ96S21 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB40CQ96S21 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB40CQ96S21 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
RAB40CQ96S21 AC002350.2-201ENST00000623894 1828 ntBASIC11.56□□□□□ -0.56
RAB40CQ96S21 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB40CQ96S21 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC11.56□□□□□ -0.56
RAB40CQ96S21 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB40CQ96S21 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC11.56□□□□□ -0.56
RAB40CQ96S21 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
RAB40CQ96S21 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB40CQ96S21 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB40CQ96S21 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB40CQ96S21 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB40CQ96S21 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB40CQ96S21 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB40CQ96S21 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
RAB40CQ96S21 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB40CQ96S21 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
RAB40CQ96S21 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB40CQ96S21 OSM-203ENST00000403463 464 ntTSL 3 BASIC11.56□□□□□ -0.56
RAB40CQ96S21 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB40CQ96S21 RAC2-204ENST00000406508 893 ntTSL 5 BASIC11.56□□□□□ -0.56
RAB40CQ96S21 RN7SKP175-201ENST00000408472 289 ntBASIC11.56□□□□□ -0.56
RAB40CQ96S21 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC11.56□□□□□ -0.56
RAB40CQ96S21 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC11.56□□□□□ -0.56
RAB40CQ96S21 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB40CQ96S21 TSPY16P-201ENST00000449843 468 ntBASIC11.56□□□□□ -0.56
RAB40CQ96S21 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
RAB40CQ96S21 FADS2-205ENST00000517839 469 ntTSL 3 BASIC11.56□□□□□ -0.56
RAB40CQ96S21 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC11.56□□□□□ -0.56
RAB40CQ96S21 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC11.56□□□□□ -0.56
RAB40CQ96S21 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB40CQ96S21 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC11.56□□□□□ -0.56
RAB40CQ96S21 AP001063.1-201ENST00000568332 529 ntBASIC11.56□□□□□ -0.56
RAB40CQ96S21 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms