Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC16.81■□□□□ 0.28
SNED1Q8TER0 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC16.81■□□□□ 0.28
SNED1Q8TER0 DPY19L2P4-201ENST00000479881 442 ntBASIC16.81■□□□□ 0.28
SNED1Q8TER0 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC16.81■□□□□ 0.28
SNED1Q8TER0 AC233724.9-201ENST00000511694 407 ntBASIC16.81■□□□□ 0.28
SNED1Q8TER0 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC16.81■□□□□ 0.28
SNED1Q8TER0 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC16.81■□□□□ 0.28
SNED1Q8TER0 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC16.81■□□□□ 0.28
SNED1Q8TER0 PHBP18-201ENST00000546648 813 ntBASIC16.81■□□□□ 0.28
SNED1Q8TER0 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC16.81■□□□□ 0.28
SNED1Q8TER0 AP001462.1-201ENST00000594089 452 ntBASIC16.81■□□□□ 0.28
SNED1Q8TER0 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNED1Q8TER0 AC009041.4-201ENST00000620075 638 ntBASIC16.81■□□□□ 0.28
SNED1Q8TER0 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC16.81■□□□□ 0.28
SNED1Q8TER0 AC005865.2-202ENST00000635814 725 ntBASIC16.81■□□□□ 0.28
SNED1Q8TER0 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC16.81■□□□□ 0.28
SNED1Q8TER0 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNED1Q8TER0 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNED1Q8TER0 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SNED1Q8TER0 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNED1Q8TER0 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNED1Q8TER0 PTN-202ENST00000393083 1599 ntTSL 5 BASIC16.81■□□□□ 0.28
SNED1Q8TER0 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.81■□□□□ 0.28
SNED1Q8TER0 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNED1Q8TER0 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNED1Q8TER0 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SNED1Q8TER0 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.81■□□□□ 0.28
SNED1Q8TER0 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SNED1Q8TER0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNED1Q8TER0 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SNED1Q8TER0 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNED1Q8TER0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNED1Q8TER0 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.81■□□□□ 0.28
SNED1Q8TER0 LINC02228-204ENST00000642115 2962 ntBASIC16.81■□□□□ 0.28
SNED1Q8TER0 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNED1Q8TER0 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNED1Q8TER0 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNED1Q8TER0 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC16.81■□□□□ 0.28
SNED1Q8TER0 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNED1Q8TER0 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.81■□□□□ 0.28
SNED1Q8TER0 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.81■□□□□ 0.28
SNED1Q8TER0 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNED1Q8TER0 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNED1Q8TER0 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNED1Q8TER0 HSD3BP1-201ENST00000286193 1111 ntBASIC16.8■□□□□ 0.28
SNED1Q8TER0 SNX15-201ENST00000352068 771 ntTSL 5 BASIC16.8■□□□□ 0.28
SNED1Q8TER0 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SNED1Q8TER0 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC16.8■□□□□ 0.28
SNED1Q8TER0 MBP-230ENST00000528160 584 ntTSL 5 BASIC16.8■□□□□ 0.28
SNED1Q8TER0 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC16.8■□□□□ 0.28
SNED1Q8TER0 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC16.8■□□□□ 0.28
SNED1Q8TER0 MIR5091-201ENST00000578707 93 ntBASIC16.8■□□□□ 0.28
SNED1Q8TER0 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.8■□□□□ 0.28
SNED1Q8TER0 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SNED1Q8TER0 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNED1Q8TER0 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNED1Q8TER0 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SNED1Q8TER0 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SNED1Q8TER0 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC16.8■□□□□ 0.28
SNED1Q8TER0 AC093462.1-201ENST00000621167 1683 ntBASIC16.8■□□□□ 0.28
SNED1Q8TER0 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.8■□□□□ 0.28
SNED1Q8TER0 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNED1Q8TER0 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNED1Q8TER0 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNED1Q8TER0 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNED1Q8TER0 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNED1Q8TER0 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNED1Q8TER0 AP002414.2-201ENST00000591780 3365 ntBASIC16.8■□□□□ 0.28
SNED1Q8TER0 AC005912.2-201ENST00000619492 2400 ntBASIC16.8■□□□□ 0.28
SNED1Q8TER0 AC020910.6-201ENST00000623084 1459 ntBASIC16.8■□□□□ 0.28
SNED1Q8TER0 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNED1Q8TER0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SNED1Q8TER0 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNED1Q8TER0 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNED1Q8TER0 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNED1Q8TER0 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNED1Q8TER0 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNED1Q8TER0 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SNED1Q8TER0 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.79■□□□□ 0.28
SNED1Q8TER0 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNED1Q8TER0 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNED1Q8TER0 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNED1Q8TER0 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC16.79■□□□□ 0.28
SNED1Q8TER0 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC16.79■□□□□ 0.28
SNED1Q8TER0 TPT1P6-201ENST00000458298 514 ntBASIC16.79■□□□□ 0.28
SNED1Q8TER0 RPL29P2-201ENST00000488409 460 ntBASIC16.79■□□□□ 0.28
SNED1Q8TER0 OR4A49P-201ENST00000527050 632 ntBASIC16.79■□□□□ 0.28
SNED1Q8TER0 URB1-AS1-201ENST00000534991 831 ntBASIC16.79■□□□□ 0.28
SNED1Q8TER0 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNED1Q8TER0 AC132812.1-201ENST00000583145 892 ntBASIC16.79■□□□□ 0.28
SNED1Q8TER0 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC16.79■□□□□ 0.28
SNED1Q8TER0 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
SNED1Q8TER0 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
SNED1Q8TER0 AL139424.3-202ENST00000641619 917 ntBASIC16.79■□□□□ 0.28
SNED1Q8TER0 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNED1Q8TER0 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNED1Q8TER0 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNED1Q8TER0 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC16.79■□□□□ 0.28
SNED1Q8TER0 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNED1Q8TER0 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms